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Report for CCDS72865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72865.1 Public Homo sapiens 1 NUDT17 24 110 108 CCDS HistoryNCBI Gene:200035Re-query CCDS DB by CCDS ID:72865.1Re-query CCDS DB by GeneID:200035See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72865.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334513.6 ENSP00000334437.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334513.6Link to Ensembl Protein Viewer:ENSP00000334437.5Re-query CCDS DB by Nucleotide ID:ENST00000334513Re-query CCDS DB by Protein ID:ENSP00000334437
Original member Current member NCBI NM_001012758.3 NP_001012776.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012758.3Link to Protein Sequence:NP_001012776.1Re-query CCDS DB by Nucleotide ID:NM_001012758Re-query CCDS DB by Protein ID:NP_001012776Link to BLAST:NP_001012776.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012776.1 328 P0C025 328 100% 0 0

Chromosomal Locations for CCDS 72865.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 145845641 145845832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145846013 145846196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145846433 145846458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145846598 145846690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145847250 145847348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145847583 145847719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145848112 145848264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145848377 145848479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGCCGAGGTGCGGGTGCAGCTGCTCCTGTCCCGGCGTCCGGAGTCGGTGAGCTTCGCACGGAGTGTGT
GTGGCCTCCTGGGAGCCGGACCAGGGCTCGGGACGTGGCCCATTCACTGCAGCTTGAAGCGAGGACGGCT
TGTCCTCTCGAGCAGGCCCTTCCCAGGCGCCTCCGCTAGGCTTCCGCTCCAGCGACCCCCTTTCTGCCCT
TTTGCGGCCCTGGAGGAGCGGCCCAGGGTCCCTGGGGCTGAGCTGCCCACAGATCGAGGTGTGGACCTGG
GTGTGGCCGTCATTCTGCAGTCCAGCGACAAGACTGTCTTGCTAACCCGAAGGGCACGCACCCTGAGCGT
TTCCCCCAACCTCTGGGTACCCCCGGGTGGGCACGTGGAACTTGAGGAGGAGCTGCTGGACGGAGGGCTT
CGAGAACTTTGGGAGGAGAGTGGACTACACCTGCCCCAGGGCCAGTTCTCTTGGGTCCCTCTGGGTTTAT
GGGAGTCTGCCTACCCTCCTAGGCTGAGCTGGGGTTTACCCAAATACCATCACATTGTTCTGTATCTACT
CGTGATCTCCCAGGAATCACAGCAGCAGTTGCAGGCCCGGATCCAACCAAACCCAAATGAGGTGAGCGCC
CTTATGTGGCTGACACCAGATGTAGCTGCTGCAGTGGCTGCCGCAGAGGATGGGACAGAGACACCCGGAC
TTCTCCCCCAGGACCTACCACCCTCTGTCCTTGCAGTGGAACTAGAGGAGGATGGAAGAGCCCGACCTCT
GGTCCTGCACATGTCCACCCTCCTGCGGATGATCCCAACCATGGCAGAGGACAAAGAGAGAGTCAGCACT
GGAACCAAGTTTGCCCTCAAGCTCTGGCTGCAACATCTGGGCAGAACACCCCCACCGTGTAAAAGTGCAG
CTTACCTGGACCCAGGGCCAGCAAAGGAAGAATGGAACATGGACCCTCTTCCCCCAAACCAGGGGTCTGG
AAAGTGA

Translation (328 aa):
MAEVRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFPGASARLPLQRPPFCP
FAALEERPRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGL
RELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPKYHHIVLYLLVISQESQQQLQARIQPNPNEVSA
LMWLTPDVAAAVAAAEDGTETPGLLPQDLPPSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVST
GTKFALKLWLQHLGRTPPPCKSAAYLDPGPAKEEWNMDPLPPNQGSGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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