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Report for CCDS72383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72383.1 Public Mus musculus X Fgf13 23 108 98 CCDS HistoryNCBI Gene:14168Re-query CCDS DB by CCDS ID:72383.1Re-query CCDS DB by GeneID:14168See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72383.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119306.1 ENSMUSP00000113206.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119306.1Link to Ensembl Protein Viewer:ENSMUSP00000113206.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119306Re-query CCDS DB by Protein ID:ENSMUSP00000113206
Original member Current member NCBI NM_001290415.1 NP_001277344.1 Accepted alive Link to Nucleotide Sequence:NM_001290415.1Link to Protein Sequence:NP_001277344.1Re-query CCDS DB by Nucleotide ID:NM_001290415Re-query CCDS DB by Protein ID:NP_001277344Link to BLAST:NP_001277344.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277344.1 192 P70377-2 192 100% 0 0

Chromosomal Locations for CCDS 72383.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 59063533 59063669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 59067401 59067599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 59125894 59125997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 59131840 59131950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 59166013 59166040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGCTTTGTTAAGGAAGTCATATTCAGAGCCTCAGCTTAAGGGTATAGTTACCAAACTATACAGCCGAC
AAGGCTACCACTTGCAACTGCAGGCAGATGGAACCATTGATGGCACCAAAGACGAGGACAGCACTTACAC
TCTGTTTAACCTCATCCCTGTGGGTCTTCGGGTGGTGGCTATTCAAGGAGTTCAAACCAAGCTGTATTTG
GCAATGAACAGCGAGGGATACTTGTACACCTCGGAACATTTCACACCTGAGTGCAAATTCAAAGAATCAG
TGTTTGAAAATTATTACGTGACATACTCATCAATGATCTACCGTCAGCAGCAATCCGGCCGAGGGTGGTA
TCTAGGTCTGAACAAAGAAGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAACAAGCCTGCAGCACAT
TTTCTGCCCAAACCACTGAAAGTGGCCATGTACAAGGAGCCATCTCTGCACGATCTCACGGAGTTCTCCC
GATCTGGAAGTGGGACCCCGACCAAGAGCAGAAGCGTCTCTGGTGTACTGAATGGAGGCAAATCCATGAG
CCACAACGAATCAACGTAG

Translation (192 aa):
MALLRKSYSEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYL
AMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAH
FLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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