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Report for CCDS71041.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71041.1 Public Mus musculus 2 4930402F06Rik 23 108 98 CCDS HistoryNCBI Gene:74854Re-query CCDS DB by CCDS ID:71041.1Re-query CCDS DB by GeneID:74854See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71041.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113009.1 ENSMUSP00000108632.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113009.1Link to Ensembl Protein Viewer:ENSMUSP00000108632.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113009Re-query CCDS DB by Protein ID:ENSMUSP00000108632
Original member NCBI NM_001272040.1 NP_001258969.1 Updated not alive Link to Nucleotide Sequence:NM_001272040.1Link to Protein Sequence:NP_001258969.1Re-query CCDS DB by Nucleotide ID:NM_001272040Re-query CCDS DB by Protein ID:NP_001258969
Current member NCBI NM_001272040.2 NP_001258969.1 Accepted alive Link to Nucleotide Sequence:NM_001272040.2Link to Protein Sequence:NP_001258969.1Re-query CCDS DB by Nucleotide ID:NM_001272040Re-query CCDS DB by Protein ID:NP_001258969Link to BLAST:NP_001258969.1

Chromosomal Locations for CCDS 71041.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 35375658 35376351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35380383 35380526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35385619 35385669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35389578 35389594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGACGTATCAGTGCTGGTCTCTGAAAAACCAACCAGAACTCCAGCCCTCAGACTGGTTTAACGCCACAA
TGGACTCAACACACATGGGCATGAGAGCTACTAACTGGTCCGCTCCGATTGTGTGGACCAACACTTACAA
TGAGTTAGTCTTGGCAAGTTATTATAAGAAGCATCCAGTTACCGTGGGGTTGATCGTGTTTGCAGTGGGA
AGATACCTTTTGTACTACTTGGGTCACTTCCTGGAATCTGCCGATAGGTTCTTCATGGTCAACCAGAAGG
TCATCATTTACATCATGCTGGACGACTTCTCCTATATGCCATGGGTAGATCTGAGTCGCCATCGGACACT
AAAGATTTTTAAGATTAAGCAAGAGCGGAGGTGGCAAGATATCAGCATGGTGCGCATGAAGGTCATCAGT
GAACACATCGCAGGTCACATACAGCATGAGGTTGACTATGTCTTCTGCATGGATGTGGATCAGATATTCA
AAGCCAAGTACGGTCTGGAGACTCTGGGAGACTCTGTAGCTCAGTTGCACACGTATTGGTACAAGGAAAG
TCCAAGCAAAGTACCTTATGAGAGGAACAAGTCATCAGAAGCGTACATAGCAGTAGGCGAGGGGGACTTT
TATTACCATGCTGCTGTTTTTGGAGGCACAACCACTCAGGTTTTCAAGATTACCAAGGAGTGTGCCAAAG
CAATTATGAAAGATAAGAAAAATAACATTGAAGCAGTTTGGCATGATGAAAGCCATTTAAACAAGTATTT
CTTTCTCCATAGACCCACTAAACTCTTGTCACCAGAATATTGCTGGGATTTAAGTAAGAATAAGACTTCT
GATATTAAGACTGTCAAACTCGCTTGGAACTTTAAGAACTATAAATTTCTTAGAAGGCGCCTATAA

Translation (301 aa):
MTYQCWSLKNQPELQPSDWFNATMDSTHMGMRATNWSAPIVWTNTYNELVLASYYKKHPVTVGLIVFAVG
RYLLYYLGHFLESADRFFMVNQKVIIYIMLDDFSYMPWVDLSRHRTLKIFKIKQERRWQDISMVRMKVIS
EHIAGHIQHEVDYVFCMDVDQIFKAKYGLETLGDSVAQLHTYWYKESPSKVPYERNKSSEAYIAVGEGDF
YYHAAVFGGTTTQVFKITKECAKAIMKDKKNNIEAVWHDESHLNKYFFLHRPTKLLSPEYCWDLSKNKTS
DIKTVKLAWNFKNYKFLRRRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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