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Report for CCDS6612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6612.1 Public Homo sapiens 9 FRMPD1 24 110 108 CCDS HistoryNCBI Gene:22844Re-query CCDS DB by CCDS ID:6612.1Re-query CCDS DB by GeneID:22844See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 6612.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377765.8 ENSP00000366995.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377765.8Link to Ensembl Protein Viewer:ENSP00000366995.3Re-query CCDS DB by Nucleotide ID:ENST00000377765Re-query CCDS DB by Protein ID:ENSP00000366995
Original member Current member EBI ENST00000539465.5 ENSP00000444411.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539465.5Link to Ensembl Protein Viewer:ENSP00000444411.1Re-query CCDS DB by Nucleotide ID:ENST00000539465Re-query CCDS DB by Protein ID:ENSP00000444411
Original member Current member NCBI NM_001371223.1 NP_001358152.1 Accepted alive Link to Nucleotide Sequence:NM_001371223.1Link to Protein Sequence:NP_001358152.1Re-query CCDS DB by Nucleotide ID:NM_001371223Re-query CCDS DB by Protein ID:NP_001358152Link to BLAST:NP_001358152.1
Original member Current member NCBI NM_001371224.1 NP_001358153.1 Accepted alive Link to Nucleotide Sequence:NM_001371224.1Link to Protein Sequence:NP_001358153.1Re-query CCDS DB by Nucleotide ID:NM_001371224Re-query CCDS DB by Protein ID:NP_001358153Link to BLAST:NP_001358153.1
Original member Current member NCBI NM_001371225.1 NP_001358154.1 Accepted alive Link to Nucleotide Sequence:NM_001371225.1Link to Protein Sequence:NP_001358154.1Re-query CCDS DB by Nucleotide ID:NM_001371225Re-query CCDS DB by Protein ID:NP_001358154Link to BLAST:NP_001358154.1
Original member Current member NCBI NM_014907.3 NP_055722.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014907.3Link to Protein Sequence:NP_055722.2Re-query CCDS DB by Nucleotide ID:NM_014907Re-query CCDS DB by Protein ID:NP_055722Link to BLAST:NP_055722.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358152.1 1578 Q5SYB0-1 1578 100% 0 0
NP_001358153.1 1578 Q5SYB0-1 1578 100% 0 0
NP_001358154.1 1578 Q5SYB0-1 1578 100% 0 0
NP_055722.2 1578 Q5SYB0-1 1578 100% 0 0

Chromosomal Locations for CCDS 6612.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 37692642 37692742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37707416 37707573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37708399 37708501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37711350 37711395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37719069 37719176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37724225 37724320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37729728 37729853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37730984 37731103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37732304 37732440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37733473 37733599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37733730 37733825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37735552 37735734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37737096 37737243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37740078 37740884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37744389 37746769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4737 nt):
ATGGAAGAGCTGGAGACCAGTTTATTCCAGACACGGAAAGCACATAGAATAGAACAAATGGTGGCAAGAT
GGCTTCGGCGCTCCCGGGACAGCTCGGCCCGGGCTAAAGTTGCTGCAGCTGATGGGCCCGCCAGGAACCC
AACTCAGACCCTCATCCCTGTGCGACACACAGTAAAGATAGACAAAGACACCCTCCTCCAGGACTATGGA
TTTCACATTTCTGAGAGCCTTCCCCTTACAGTGGTGGCTGTCACAGCAGGAGGCTCTGCTCACGGCAAGC
TTTTCCCTGGTGATCAGATCCTCCAAATGAACAATGAGCCTGCTGAAGACCTTTCCTGGGAACGAGCAGT
CGATATTCTCAGGGAAGCAGAAGATTCTCTTTCAATCACAGTTGTTCGCTGCACGTCGGGAGTCCCTAAA
TCGTCCTTCCTGACCGAGGAGAAGAGAGCCAGACTGAAGACCAACCCCGTGAAGGTGCACTTTGCTGAAG
AAGTGCTCATCAGTGGACACAGCCAGGGTAATTCTCTGCTGTGTATGCCCAACGTGCTCAAGCTATACTT
GGAGAATGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACACAACCGTGAAGGACATCATCCTCACCGTG
AAGGAGAAGCTGTCCATCCGAAGTATCGAGTACTTTGCACTGGCCCTGGAAGAGCAGTACAGCATCTCCC
GGCTGCACCTGCTGCACGAAGAGGAACTCATCCAGCAGGTGGTAGAAAGGGAGGAGTCACATGACTACCG
CTGCCTCTTCAGGGTCTGTTTTGTTCCCAAGGACCCCCTGGACCTCCTGAAAGAAGACCCCGTGGCCTTT
GAATACCTCTATCTGCAGAGCTGCAGCGATGTGCTCCAGGAGCGCTTTGCTGTAGAAATGAAATGTAGCT
CTGCACTCCGACTCGCGGCTCTGCACATCCAGGAACGGATCTACGCCTGTGCCCAGCCACAGAAGATCTC
TTTAAAGTATATAGAGAAAGACTGGGGAATAGAGAACTTTATATCTCCAACTTTACTCCGAAACATGAAA
GGCAAAGACATCAAGAAAGCCATTAGCTTCCACATGAAGAGGAACCAGAATTTGCTGGAACCCCGACAGA
AGCAACTTATTTCTGCTGCCCAGCTACGTTTAAATTATCTACAGATCCTCGGAGAACTCAAGACATATGG
TGGAAGAATCTTTAATGCTACTTTAATGTTACAGGATAGAGAATCCTACATTGCCCTTCTAGTTGGAGCC
AAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCAAACA
TCAGCCGTGTAGAGCTAACGGAAGAGTCTGAGAAAGTGAGCGTCGTCAAAGTGTATCTTCAGGACGTCAA
GGTTCTGACTTTGCTGCTGGAATCCAACAGTGCAAAAGACCTAGCCTGCCTGATTGCTGGGTACTACAGG
CTGTTGGTTGACCCAGTTACCTCCATTTTCCTCTGGCCTGGAAACAAACAACAAGCGCACCGGGTATCTG
CAGAAGAAGGCTATGAATCCAGGGCCTGCAGTGACTCAGAGGAGTCCTCTGAGGTGGACTGCGTACTCGA
ACCTCTCTCTGACAGGCGCCTGGTGAAACTGGCACCCTGCAGATCACTCATAAAGGAGGAGCAGCCTCCT
GGGAACAGCCCCACACCTGAGGTGGCTAGGAGGGGCCCCAGCACCTGCGGGGCCAGCAGCACGACAGACA
GTGCCGAGTCCGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGA
GTCCATGGACGCTCTGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTT
GGCTCGCCAGGCCTCGCAGAGAGCATTGACTCTGACAGCCAGGAGGAGAGAAGCGGGATTGAAACCAGTG
GCTTCCTCTGTCTCCTGGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGAAGACAGAGTTTTCCGAGAG
TGCTGCTTTGGAGACATTTGGCTGGGCACCAGAACTGAGCACAGTCAGGCTGGACCCCAGGCTGTATGAA
GGCAGCCACGCTGACTACTACAGCCTGTGTTCCAGTGTCTCCCCGGCCAGCTACCTGAGTGACAGTTCCG
AGAGTACAGCTTCCCGGCAAGGGGGAGCCCCGCCAGCCTGGGGTCAGCAGGGCTGGACTGAGGCCCAGCC
CAGTTCCATGCTGGAACCCCTGGCCCTGCACCCACCACTGGCCTTTGAGGATGGCAGCTCAGATGAGGAA
TACTATGACGCGGCTGATAAGCTCACTCCCCCAGGCCCCCCGTCAGGGCCCAGAGATGTTTCTACTGCAG
AACCCAGTGCCACAAGCTTGCAGAATAAGGCCAGCACTTCTAGCCCTGAGAACAGCCTGCCTTGTGGGCC
AGATGGAAGACAGCCAAGCAGGAGGGGAGGGGTGAAGAAATATGCCAAGACCCTGAGGAAAAGAAGGTCT
TTCCTACAGACCGACTACACCTCTCAGGTCTCATTTCCCCTGGTGCCATCAGCCTCCCTGGAGAGTGTAG
ACGACGTGTGCTACTATGACAGGGAGCCCTACCTGGCCCTTGGTGCACCCTCCCCAACTGTGTCCTCTCT
GCAGGACATGCAGGGTGAGCCTGGCCTTCTGGAGACCAAGGCCTTGGGGCTGCTGGCTCCTCTGAGGGAG
ACCAAGAGCACAAACCCAGCCTCCAGGGTCATGGAGATGGAGCCCGAGACCATGGAAACCAAATCAGTCA
TCGACTCTCGAGTGTCTTCTATTTCTGCCATTCGCTTCCGGATTGACCCCAACAATAAAGAGAATTCTGG
TGTTGTCCCTGCTGCCAGCTCCTCAGCAAGCACTCCTCACTGTTCTAACCCAGGTTCATCTGGCCCAGAT
ACTGCTCAGGCAAGGCCTTCCCAAATCTTACCTCTATCTCAAGACCTGGATGGGATTGCCCCCAAAGAAC
CAACCATAGAGCATGGAGACAGCTCCTTCTCCCTCTCCAGTGGTGACCCTAACCCAGACAGAGCCTGCCT
GGCCAGCAACCCAGGACTAAATAATGTCTCTCAAGGAGACACACTAGAGCTCCAGTTGGAGCCCCATGTC
CAGTTGGAAATGGGATTGGAATCTTTTTGTACAAATCATATACAAGAAACTGCCCCCAAATACACAGAGC
CTTTGTTGTCTCCTAGAGATGAGCCTAGAAGTGATGAATGTGGAATAAATCCAGGAGAGAAGATAGCTTC
TATCCCTACAAAGGAAGAGCCACAAGGACAACTATCTCTGGAAAGAGACAGAGAAGTTACAAACAAAAAT
GGCACCAACGTATTTCAGGAGGAGTCTAGGAAGGATTCAGGTGACTCCCCGGGTGATGTGTCAAATAATG
TTTCACAGACTCTTGATATTAGCTCTCCAGCTGGTAAAATAGTAACCTCCCTTTCTTTAGATGCTCCTGT
AACAGGGACCGAGCAGATCCCACCACATCCCCCTAGAGACCCTCAAGGACAGAGCAGAGAACCCCCAGGG
CAAGGCTGCCAGGCTCAAGAACAAAAACTATTCGTAGAGTTGGATTTAGACCCTGATTTCTTTCTTGGGA
AGCAGACAGTTTCACCAGCCGTCCCTCCAGAGGGGATCAAGGCAGAGGCACCTAACCATGTGACAGGGCA
AGATATAGCCCCTAGGGACAGCCCTGAGTGGGTCTGTTTTAATCCTGAGCCTTCCCTGCCAGAACCACTA
CCATGTCCACAAGAGGATCCTCACTTAGAAACTTCAAACCATTGCTTACTCTCAGAAGGCAAAAGTGACA
GCTCTAGCATCTGCCTTTCTGCTGAGAAGTCTTTTCTGTGCTTTGCCCCAGAAAGCCATCCTGAAGTCTC
TGCCAGTCTCAGGGTGGCCACATCTTTGGGTTTTGCAGGCATGAATGAGATGGTGGCTCCCAGGATAGGG
ATGGACCAGTGCAGCTGTCAGTTCTCCTATGCCACATGCTTCCGTGGCCCGCAGCCTGAGACAGAGGAAG
AAGACAGGGACTTGGAAGCACACCCCATGGCCCCCCTCACCTCACCGCCCTCTGCGGGAAGCCCGGTGGT
TCTGCCCTGGAGGCCTGCCCGAGCCCACAGCTGCACCACCGCACCCCTGTCGAGGAAAAGCCACATCTGG
CCAGAGTACTGCTCCAGGGCACTGAGACAGCTGAAAGCCACCCCTGCCAGCACCCCTGAGGGCTTCATCC
AACTCATGGAGAGCTTGCTGGAGCTACAAGACATTTTAGAAACTTCCTGGGGGGTTGGAAACAAACATCC
CCCAGAGAAGTGCACCTGGCACTTTACCGAAAGCCGGAGCCGCCTCTGCATGGGCTCCCAGAAGCTCCTG
TCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCAGGGGGCCGTGCGTGACACCT
TCCAGCACCTGGTCCAGCTGGCCGGCCTGTGCTTTCAGTTCACAGACTGTAGCCGCTGCTCCGCCCGGCA
CAGGGAGGCAGCGGGGAACCTGAGGGATGTGGTGTACACCTACCATCAGTTTATAGAGGCTGCTAAATCG
ACCTGCGAGAGAGGCTACCACGACCTGAGTGTGAAACTCCTGGCCCGTCAGTGCACGGCCCTCACGGCCG
CCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATCCACGGCCCTGTAA

Translation (1578 aa):
MEELETSLFQTRKAHRIEQMVARWLRRSRDSSARAKVAAADGPARNPTQTLIPVRHTVKIDKDTLLQDYG
FHISESLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCTSGVPK
SSFLTEEKRARLKTNPVKVHFAEEVLISGHSQGNSLLCMPNVLKLYLENGQTKAFKFEANTTVKDIILTV
KEKLSIRSIEYFALALEEQYSISRLHLLHEEELIQQVVEREESHDYRCLFRVCFVPKDPLDLLKEDPVAF
EYLYLQSCSDVLQERFAVEMKCSSALRLAALHIQERIYACAQPQKISLKYIEKDWGIENFISPTLLRNMK
GKDIKKAISFHMKRNQNLLEPRQKQLISAAQLRLNYLQILGELKTYGGRIFNATLMLQDRESYIALLVGA
KYGISQVINSKLNIMSTLAEFANISRVELTEESEKVSVVKVYLQDVKVLTLLLESNSAKDLACLIAGYYR
LLVDPVTSIFLWPGNKQQAHRVSAEEGYESRACSDSEESSEVDCVLEPLSDRRLVKLAPCRSLIKEEQPP
GNSPTPEVARRGPSTCGASSTTDSAESEASDSANTESRGYRTSGSSESMDALEEDDLDTCSSSRSTFFHF
GSPGLAESIDSDSQEERSGIETSGFLCLLDLAQRANPQCQKTEFSESAALETFGWAPELSTVRLDPRLYE
GSHADYYSLCSSVSPASYLSDSSESTASRQGGAPPAWGQQGWTEAQPSSMLEPLALHPPLAFEDGSSDEE
YYDAADKLTPPGPPSGPRDVSTAEPSATSLQNKASTSSPENSLPCGPDGRQPSRRGGVKKYAKTLRKRRS
FLQTDYTSQVSFPLVPSASLESVDDVCYYDREPYLALGAPSPTVSSLQDMQGEPGLLETKALGLLAPLRE
TKSTNPASRVMEMEPETMETKSVIDSRVSSISAIRFRIDPNNKENSGVVPAASSSASTPHCSNPGSSGPD
TAQARPSQILPLSQDLDGIAPKEPTIEHGDSSFSLSSGDPNPDRACLASNPGLNNVSQGDTLELQLEPHV
QLEMGLESFCTNHIQETAPKYTEPLLSPRDEPRSDECGINPGEKIASIPTKEEPQGQLSLERDREVTNKN
GTNVFQEESRKDSGDSPGDVSNNVSQTLDISSPAGKIVTSLSLDAPVTGTEQIPPHPPRDPQGQSREPPG
QGCQAQEQKLFVELDLDPDFFLGKQTVSPAVPPEGIKAEAPNHVTGQDIAPRDSPEWVCFNPEPSLPEPL
PCPQEDPHLETSNHCLLSEGKSDSSSICLSAEKSFLCFAPESHPEVSASLRVATSLGFAGMNEMVAPRIG
MDQCSCQFSYATCFRGPQPETEEEDRDLEAHPMAPLTSPPSAGSPVVLPWRPARAHSCTTAPLSRKSHIW
PEYCSRALRQLKATPASTPEGFIQLMESLLELQDILETSWGVGNKHPPEKCTWHFTESRSRLCMGSQKLL
SSCRHVIRMDQSPEEMQGAVRDTFQHLVQLAGLCFQFTDCSRCSARHREAAGNLRDVVYTYHQFIEAAKS
TCERGYHDLSVKLLARQCTALTAAVFCLTQKFRASTAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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