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Report for CCDS59427.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59427.1 Public Homo sapiens 19 MZF1 24 110 108 CCDS HistoryNCBI Gene:7593Re-query CCDS DB by CCDS ID:59427.1Re-query CCDS DB by GeneID:7593See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59427.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594234.5 ENSP00000469378.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594234.5Link to Ensembl Protein Viewer:ENSP00000469378.1Re-query CCDS DB by Nucleotide ID:ENST00000594234Re-query CCDS DB by Protein ID:ENSP00000469378
Original member Current member NCBI NM_001267033.2 NP_001253962.1 Accepted alive Link to Nucleotide Sequence:NM_001267033.2Link to Protein Sequence:NP_001253962.1Re-query CCDS DB by Nucleotide ID:NM_001267033Re-query CCDS DB by Protein ID:NP_001253962Link to BLAST:NP_001253962.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001253962.1 290 P28698-3 290 100% 0 0

Chromosomal Locations for CCDS 59427.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58563160 58563260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58569277 58569397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58569516 58569586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58570344 58570527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58570994 58571389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (873 nt):
ATGAGGCCTGCGGTGCTGGGCTCCCCAGACCGAGCACCCCCAGAAGATGAGGGGCCTGTCATGGTGAAGC
TAGAGGACTCTGAGGAGGAGGGTGAGGCTGCCTTATGGGACCCAGGCCCTGAAGCTGCACGCCTGCGTTT
CCGGTGCTTCCGCTATGAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCAGCTCCGAGAGCTGTGTCGC
CAGTGGCTGCGTCCAGAGGTACGCTCCAAGGAGCAGATGCTGGAGCTGTTGGTGCTGGAGCAGTTCCTGG
GCGCACTGCCCCCTGAGATCCAGGCCCGTGTGCAGGGGCAGCGGCCAGGCAGCCCCGAGGAGGCTGCTGC
CCTAGTAGATGGGCTGCGCCGGGAGCCGGGCGGACCCCGGAGATGGGTCACAGTCCAGGTGCAGGGCCAG
GAGGTCCTATCAGAGAAGATGGAGCCCTCCAGTTTCCAGCCCCTACCTGAAACTGAGCCTCCAACTCCAG
AGCCTGGGCCCAAGACACCTCCTAGGACTATGCAGGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTC
AGAGGTTACAGAGGACTCAGATTTCCTGGAGTCTGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCACC
CTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGC
CTGAGGGTCCCTCATGGAGGGAGCACCCCAGGGCCCTGTGGCATGAGGAAGCTGGGGGCATCTTCTCCCC
AGGGGCCGGAGCCGGGGCCGCCCCAGCACTGGGGGCGGGGTGGTTAGGGGCGGCCGTTGCGATGTATGTG
GCAAGGTGTTCAGCCAACGCAGCAACCTGCTGA

Translation (290 aa):
MRPAVLGSPDRAPPEDEGPVMVKLEDSEEEGEAALWDPGPEAARLRFRCFRYEEATGPQEALAQLRELCR
QWLRPEVRSKEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGLRREPGGPRRWVTVQVQGQ
EVLSEKMEPSSFQPLPETEPPTPEPGPKTPPRTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPT
LLPEEAQRCGTVLDQIFPHSKTGPEGPSWREHPRALWHEEAGGIFSPGAGAGAAPALGAGWLGAAVAMYV
ARCSANAATC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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