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Report for CCDS59365.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59365.1 Public Homo sapiens 19 FCHO1 24 110 108 CCDS HistoryNCBI Gene:23149Re-query CCDS DB by CCDS ID:59365.1Re-query CCDS DB by GeneID:23149See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59365.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594202.6 ENSP00000473001.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594202.6Link to Ensembl Protein Viewer:ENSP00000473001.1Re-query CCDS DB by Nucleotide ID:ENST00000594202Re-query CCDS DB by Protein ID:ENSP00000473001
Original member Current member NCBI NM_001161357.2 NP_001154829.1 Accepted alive Link to Nucleotide Sequence:NM_001161357.2Link to Protein Sequence:NP_001154829.1Re-query CCDS DB by Nucleotide ID:NM_001161357Re-query CCDS DB by Protein ID:NP_001154829Link to BLAST:NP_001154829.1

Chromosomal Locations for CCDS 59365.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17755165 17755191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17762762 17762853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17764375 17764449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17766669 17766810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17770425 17770577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17770792 17770896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17772457 17772555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17772645 17772741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17774239 17774283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17774394 17774478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775056 17775080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775456 17775513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775983 17776161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17776247 17776271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17776635 17776686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17778137 17778228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17778609 17778884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781231 17781343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781452 17781539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781712 17781820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17783017 17783172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17784103 17784235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17784725 17784924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17786574 17786629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17787682 17787846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17788270 17788298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2676 nt):
ATGTCGTATTTTGGGGAGCATTTTTGGGGCGAGAAAAATCATGGCTTTGAGGTCCTGTACCACAGCGTGA
AGCAGGGGCCCATCTCCACCAAGGAGCTGGCGGACTTCATCCGGGAGAGGGCCACCATCGAGGAGACCTA
CTCGAAGGCGATGGCGAAACTCTCCAAGCTGGCCAGCAACGGGACCCCCATGGGGACCTTCGCCCCGCTC
TGGGAGGTCTTCCGCGTCTCCTCGGACAAGCTGGCGCTGTGCCACCTGGAACTGACACGGAAGTTACAGG
ATCTCATCAAGGACGTTCTCCGCTACGGCGAGGAACAGCTCAAGACCCACAAGAAGTGCAAGGAGGAAGT
GGTGAGCACCTTGGATGCTGTGCAGGTACTCTCGGGCGTCAGCCAGCTCCTGCCCAAGTCCCGCGAGAAC
TACCTGAACCGTTGCATGGACCAGGAGCGGCTGCGGAGGGAGAGTACCAGCCAGAAGGAGATGGACAAGG
CGGAGACTAAAACCAAGAAGGCGGCAGAGAGCCTGCGGCGCTCAGTGGAAAAATACAACTCAGCCCGAGC
TGACTTTGAGCAGAAGATGCTGGACTCAGCCCTGCGCTTCCAAGCCATGGAGGAGACACACCTGAGGCAC
ATGAAGGCACTGCTGGGCTCATATGCTCACTCGGTGGAGGACACGCACGTGCAGATTGGGCAGGTGCATG
AGGAATTTAAGCAGAACATCGAGAACGTCAGCGTGGAGATGCTACTCAGGAAGTTTGCAGAGAGTAAGGG
CACAGGCCGGGAGAAGCCTGGACCTCTGGACTTCGAGGCATACAGTGCGGCTGCCCTGCAGGAAGCGATG
AAACGTTTGCGGGGAGCCAAGGCCTTTCGCCTTCCAGGACTAAGCCGGCGGGAGCGGGAGCCAGAGCCAC
CTGCAGCTGTAGATTTCCTGGAGCCCGATTCAGGGACATGTCCAGAGGTGGATGAAGAAGGTTTCACTGT
CCGGCCTGATGTGACCCAGAACAGCACGGCCGAGCCCTCCCGTTTCTCGTCCAGCGACTCCGACTTCGAC
GATGAAGAGCCCCGCAAGTTCTATGTGCACATCAAGCCTGCCCCGGCCCGGGCTCCAGCCTGCAGCCCCG
AGGCAGCAGCGGCACAGCTCAGGGCCACCGCGGGCAGCCTCATCCTTCCTCCTGGCCCAGGGGGCACCAT
GAAACGCCATTCTTCACGGGACGCTGCTGGGAAACCCCAGAGACCTCGGTCTGCCCCCAGAACCAGCAGC
TGTGCAGAGAGATTGCAGTCAGAGGAGCAGGTGTCCAAGAACCTCTTTGGGCCGCCCCTGGAGTCAGCCT
TTGACCACGAAGATTTTACAGGCTCTAGCAGCCTGGGCTTCACCTCCAGCCCCTCCCCTTTCTCCTCCTC
GTCGCCCGAAAACGTGGAGGATTCCGGCCTGGACTCTCCGTCCCACGCGGCACCTGGCCCCTCCCCAGAT
TCCTGGGTCCCCCGCCCAGGCACCCCGCAGAGCCCGCCCAGCTGTAGGGCGCCACCCCCAGAGGCCAGGG
GTATCCGGGCACCGCCTCTGCCAGACTCGCCGCAGCCCCTCGCCTCGTCTCCAGGCCCCTGGGGGCTGGA
GGCCTTGGCCGGAGGAGACCTGATGCCTGCACCTGCTGACCCCACAGCCAGGGAGGGCCTGGCAGCCCCA
CCCAGGAGACTTCGCTCTAGGAAGGTGTCCTGCCCTCTCACACGTAGCAATGGGGACCTGTCTCGTTCCC
TGAGCCCCTCCCCACTGGGCTCTTCAGCCGCCAGCACTGCCTTGGAACGGCCCAGCTTCTTATCCCAGAC
AGGACACGGAGTCTCCCGGGGTCCGAGCCCTGTGGTCCTGGGCTCCCAGGATGCCCTGCCCATAGCCACA
GCCTTCACAGAGTATGTCCACGCCTACTTCCGTGGCCACAGCCCCAGCTGCCTGGCTCGAGTAACTGGGG
AGCTGACCATGACCTTCCCTGCTGGCATCGTGCGTGTGTTCAGCGGGACCCCACCACCACCTGTCCTCAG
CTTCCGGCTTGTACACACAACCGCTATTGAGCACTTCCAGCCCAACGCCGATCTGCTGTTCAGTGACCCC
TCCCAGAGTGACCCTGAGACCAAAGACTTCTGGCTCAACATGGCAGCTCTGACCGAAGCCCTGCAGCGCC
AGGCAGAGCAGAACCCCACTGCCTCCTACTACAACGTGGTGCTGCTGCGATACCAGTTCTCCCGCCCGGG
TCCCCAGTCTGTGCCTCTGCAGCTCAGTGCCCACTGGCAGTGTGGAGCCACCCTCACCCAGGTCTCAGTG
GAGTACGGCTACCGGCCCGGTGCCACGGCTGTGCCCACACCACTCACGAACGTCCAGATCCTGCTGCCTG
TGGGGGAGCCTGTGACCAACGTCCGCTTGCAGCCGGCTGCCACCTGGAACCTGGAGGAGAAGCGGCTCAC
TTGGAGGCTTCCAGATGTGTCCGAGGCAGGCGGTTCTGGCCGCCTCTCTGCCAGCTGGGAGCCGCTCTCA
GGGCCCAGCACACCCAGCCCCGTGGCTGCACAGTTCACCAGCGAGGGGACCACTCTGTCGGGCGTGGACT
TGGAACTGGTGGGCAGCGGTTACCGCATGTCGCTGGTGAAGAGGAGGTTTGCCACAGCTGCACCCCCACA
GGGATGTACCTGGTGA

Translation (891 aa):
MSYFGEHFWGEKNHGFEVLYHSVKQGPISTKELADFIRERATIEETYSKAMAKLSKLASNGTPMGTFAPL
WEVFRVSSDKLALCHLELTRKLQDLIKDVLRYGEEQLKTHKKCKEEVVSTLDAVQVLSGVSQLLPKSREN
YLNRCMDQERLRRESTSQKEMDKAETKTKKAAESLRRSVEKYNSARADFEQKMLDSALRFQAMEETHLRH
MKALLGSYAHSVEDTHVQIGQVHEEFKQNIENVSVEMLLRKFAESKGTGREKPGPLDFEAYSAAALQEAM
KRLRGAKAFRLPGLSRREREPEPPAAVDFLEPDSGTCPEVDEEGFTVRPDVTQNSTAEPSRFSSSDSDFD
DEEPRKFYVHIKPAPARAPACSPEAAAAQLRATAGSLILPPGPGGTMKRHSSRDAAGKPQRPRSAPRTSS
CAERLQSEEQVSKNLFGPPLESAFDHEDFTGSSSLGFTSSPSPFSSSSPENVEDSGLDSPSHAAPGPSPD
SWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQPLASSPGPWGLEALAGGDLMPAPADPTAREGLAAP
PRRLRSRKVSCPLTRSNGDLSRSLSPSPLGSSAASTALERPSFLSQTGHGVSRGPSPVVLGSQDALPIAT
AFTEYVHAYFRGHSPSCLARVTGELTMTFPAGIVRVFSGTPPPPVLSFRLVHTTAIEHFQPNADLLFSDP
SQSDPETKDFWLNMAALTEALQRQAEQNPTASYYNVVLLRYQFSRPGPQSVPLQLSAHWQCGATLTQVSV
EYGYRPGATAVPTPLTNVQILLPVGEPVTNVRLQPAATWNLEEKRLTWRLPDVSEAGGSGRLSASWEPLS
GPSTPSPVAAQFTSEGTTLSGVDLELVGSGYRMSLVKRRFATAAPPQGCTW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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