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Report for CCDS59190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59190.1 Public Homo sapiens 1 EMC1 24 110 108 CCDS HistoryNCBI Gene:23065Re-query CCDS DB by CCDS ID:59190.1Re-query CCDS DB by GeneID:23065See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375208.7 ENSP00000364354.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375208.7Link to Ensembl Protein Viewer:ENSP00000364354.3Re-query CCDS DB by Nucleotide ID:ENST00000375208Re-query CCDS DB by Protein ID:ENSP00000364354
Original member Current member NCBI NM_001271429.2 NP_001258358.1 Accepted alive Link to Nucleotide Sequence:NM_001271429.2Link to Protein Sequence:NP_001258358.1Re-query CCDS DB by Nucleotide ID:NM_001271429Re-query CCDS DB by Protein ID:NP_001258358Link to BLAST:NP_001258358.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258358.1 971 Q8N766-4 971 100% 0 0

Chromosomal Locations for CCDS 59190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 19219303 19219482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19219569 19219698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19220764 19220848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19222624 19222834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19223396 19223569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19227313 19227450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19230844 19230963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19231261 19231422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19232624 19232773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19232936 19233135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19235130 19235252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19237142 19237238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19238017 19238139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19238795 19238857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19239231 19239302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19239818 19239985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19240297 19240446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19241016 19241142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19242345 19242473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19243614 19243707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19244906 19245030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 19251415 19251509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2916 nt):
ATGGCGGCTGAGTGGGCTTCTCGTTTCTGGCTTTGGGCTACGCTGCTGATTCCTGCGGCCGCGGTCTACG
AAGACCAAGTGGGCAAGTTTGATTGGAGACAGCAATATGTTGGGAAGGTCAAGTTTGCCTCCTTGGAATT
TTCCCCTGGATCCAAGAAGTTGGTTGTAGCCACAGAGAAGAATGTGATTGCAGCATTAAATTCCCGAACT
GGGGAGATCTATGTGATCACTGTGTCCAATGGAGGCCGAATCATGCGTTCCTGGGAGACTAACATCGGGG
GCCTGAACTGGGAGATAACCCTGGACAGTGGCAGTTTCCAGGCACTTGGGCTGGTTGGCCTGCAGGAGTC
TGTAAGGTACATCGCAGTCCTGAAGAAGACTACACTTGCCCTCCATCACCTCTCCAGTGGGCACCTCAAG
TGGGTGGAACATCTCCCAGAAAGTGACAGCATCCACTACCAGATGGTGTATTCTTACGGCTCTGGGGTGG
TGTGGGCCCTCGGAGTTGTTCCCTTCAGCCATGTGAACATTGTCAAGTTTAATGTGGAAGATGGAGAGAT
TGTTCAGCAGGTTAGGGTTTCAACTCCGTGGCTGCAGCACCTGTCTGGAGCCTGTGGTGTGGTGGATGAG
GCTGTCCTGGTGTGTCCTGACCCGAGCTCACGTTCCCTCCAAACTTTGGCTCTGGAGACGGAATGGGAGT
TGAGACAGATCCCACTGCAGTCTCTCGACTTAGAATTTGGAAGTGGATTCCAACCCCGGGTCCTGCCTAC
CCAGCCCAACCCAGTGGACGCTTCCCGGGCCCAGTTCTTCCTGCACTTGTCCCCAAGCCACTATGCTCTG
CTGCAGTACCATTATGGAACGCTGAGTTTGCTTAAAAACTTCCCACAGACTGCCCTAGTGAGCTTTGCCA
CCACTGGGGAGAAGACGGTGGCTGCAGTCATGGCCTGTCGGAATGAAGTGCAGAAAAGTAGCAGTTCTGA
AGATGGGTCAATGGGGAGCTTTTCGGAGAAGTCTAGTTCAAAGGACTCTCTGGCTTGCTTCAATCAGACC
TACACCATTAACCTATACCTCGTGGAGACAGGTCGGCGGCTGCTGGACACCACGATAACATTTAGCCTGG
AACAGAGCGGCACTCGGCCTGAGCGGCTGTATATCCAGGTGTTCTTGAAGAAGGATGACTCAGTGGGCTA
CCGGGCTTTGGTGCAGACAGAGGATCATCTGCTACTTTTCCTGCAGCAGTTGGCAGGGAAGGTGGTGCTG
TGGAGCCGTGAGGAGTCCCTGGCAGAAGTGGTGTGCCTAGAGATGGTGGACCTCCCCCTGACTGGGGCAC
AGGCCGAGCTGGAAGGAGAATTTGGCAAAAAGGCAGATGGCTTGCTGGGGATGTTCCTGAAACGCCTCTC
GTCTCAGCTTATCCTGCTGCAAGCATGGACTTCCCACCTCTGGAAAATGTTTTATGATGCTCGGAAGCCC
CGGAGTCAGATTAAGAATGAGATCAACATTGACACCCTGGCCAGAGATGAATTCAACCTCCAGAAGATGA
TGGTGATGGTAACAGCCTCAGGCAAGCTTTTTGGCATTGAGAGCAGCTCTGGCACCATCCTGTGGAAACA
GTATCTACCCAATGTCAAGCCAGACTCCTCCTTTAAACTGATGGTCCAGAGAACTACTGCTCATTTCCCC
CATCCCCCACAGTGCACCCTGCTGGTGAAGGACAAGGAGTCGGGAATGAGTTCTCTGTATGTCTTCAATC
CCATTTTTGGGAAGTGGAGTCAGGTAGCTCCCCCAGTGCTGAAGCGCCCCATCTTGCAGTCCTTGCTTCT
CCCAGTCATGGATCAAGACTACGCCAAGGTGTTGCTGTTGATAGATGATGAATACAAGGTCACAGCTTTT
CCAGCCACTCGGAATGTCTTGCGACAGCTACATGAGCTTGCCCCTTCCATCTTCTTCTATTTGGTGGATG
CAGAGCAGGGACGGCTGTGTGGATATCGGCTTCGAAAGGATCTCACCACTGAGCTGAGTTGGGAGCTGAC
CATTCCCCCAGAAGTACAGCGGATCGTCAAGGTGAAGGGGAAACGCAGCAGTGAGCACGTTCATTCCCAG
GGCCGTGTGATGGGGGACCGCAGTGTGCTCTACAAGAGCCTGAACCCCAACCTGCTGGCCGTGGTGACAG
AGAGCACAGACGCGCACCATGAGCGCACCTTTATTGGCATCTTCCTCATTGATGGCGTCACTGGGCGTAT
CATTCACTCCTCTGTGCAGAAGAAAGCCAAAGGCCCTGTCCATATCGTGCATTCAGAGAACTGGGTGGTG
TACCAGTACTGGAACACCAAGGCTCGGCGCAACGAGTTTACCGTACTGGAGCTCTATGAGGGCACTGAGC
AATACAACGCCACCGCCTTCAGCTCCCTGGACCGCCCCCAGCTGCCCCAGGTCCTCCAGCAGTCCTATAT
CTTCCCGTCCTCCATCAGTGCCATGGAGGCCACCATCACCGAACGGGGCATCACCAGCCGACACCTGCTG
ATTGGACTACCTTCTGGAGCAATTCTTTCCCTTCCTAAGGCTTTGCTGGATCCCCGCCGCCCCGAGATCC
CAACAGAACAAAGCAGAGAGGAGAACTTAATCCCGTATTCTCCAGATGTACAGATACACGCAGAGCGATT
CATCAACTATAACCAGACAGTTTCTCGAATGCGAGGTATCTACACAGCTCCCTCGGGTCTGGAGTCCACT
TGTTTGGTTGTGGCCTATGGTTTGGACATTTACCAAACTCGAGTCTACCCATCCAAGCAGTTTGACGTTC
TGAAGGATGACTATGACTACGTGTTAATCAGCAGCGTCCTCTTTGGCCTGGTTTTTGCCACCATGATCAC
TAAGAGACTGGCACAGGTGAAGCTCCTGAATCGGGCCTGGCGATAA

Translation (971 aa):
MAAEWASRFWLWATLLIPAAAVYEDQVGKFDWRQQYVGKVKFASLEFSPGSKKLVVATEKNVIAALNSRT
GEIYVITVSNGGRIMRSWETNIGGLNWEITLDSGSFQALGLVGLQESVRYIAVLKKTTLALHHLSSGHLK
WVEHLPESDSIHYQMVYSYGSGVVWALGVVPFSHVNIVKFNVEDGEIVQQVRVSTPWLQHLSGACGVVDE
AVLVCPDPSSRSLQTLALETEWELRQIPLQSLDLEFGSGFQPRVLPTQPNPVDASRAQFFLHLSPSHYAL
LQYHYGTLSLLKNFPQTALVSFATTGEKTVAAVMACRNEVQKSSSSEDGSMGSFSEKSSSKDSLACFNQT
YTINLYLVETGRRLLDTTITFSLEQSGTRPERLYIQVFLKKDDSVGYRALVQTEDHLLLFLQQLAGKVVL
WSREESLAEVVCLEMVDLPLTGAQAELEGEFGKKADGLLGMFLKRLSSQLILLQAWTSHLWKMFYDARKP
RSQIKNEINIDTLARDEFNLQKMMVMVTASGKLFGIESSSGTILWKQYLPNVKPDSSFKLMVQRTTAHFP
HPPQCTLLVKDKESGMSSLYVFNPIFGKWSQVAPPVLKRPILQSLLLPVMDQDYAKVLLLIDDEYKVTAF
PATRNVLRQLHELAPSIFFYLVDAEQGRLCGYRLRKDLTTELSWELTIPPEVQRIVKVKGKRSSEHVHSQ
GRVMGDRSVLYKSLNPNLLAVVTESTDAHHERTFIGIFLIDGVTGRIIHSSVQKKAKGPVHIVHSENWVV
YQYWNTKARRNEFTVLELYEGTEQYNATAFSSLDRPQLPQVLQQSYIFPSSISAMEATITERGITSRHLL
IGLPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSPDVQIHAERFINYNQTVSRMRGIYTAPSGLEST
CLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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