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Report for CCDS58240.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58240.1 Public Homo sapiens 12 TESPA1 24 110 108 CCDS HistoryNCBI Gene:9840Re-query CCDS DB by CCDS ID:58240.1Re-query CCDS DB by GeneID:9840See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58240.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532804.5 ENSP00000432030.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532804.5Link to Ensembl Protein Viewer:ENSP00000432030.1Re-query CCDS DB by Nucleotide ID:ENST00000532804Re-query CCDS DB by Protein ID:ENSP00000432030
Original member Current member EBI ENST00000531122.5 ENSP00000433098.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531122.5Link to Ensembl Protein Viewer:ENSP00000433098.1Re-query CCDS DB by Nucleotide ID:ENST00000531122Re-query CCDS DB by Protein ID:ENSP00000433098
Original member Current member EBI ENST00000524622.5 ENSP00000435622.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524622.5Link to Ensembl Protein Viewer:ENSP00000435622.1Re-query CCDS DB by Nucleotide ID:ENST00000524622Re-query CCDS DB by Protein ID:ENSP00000435622
Original member Current member NCBI NM_001261844.1 NP_001248773.1 Accepted alive Link to Nucleotide Sequence:NM_001261844.1Link to Protein Sequence:NP_001248773.1Re-query CCDS DB by Nucleotide ID:NM_001261844Re-query CCDS DB by Protein ID:NP_001248773Link to BLAST:NP_001248773.1
Original member Current member NCBI NM_001351148.1 NP_001338077.1 Accepted alive Link to Nucleotide Sequence:NM_001351148.1Link to Protein Sequence:NP_001338077.1Re-query CCDS DB by Nucleotide ID:NM_001351148Re-query CCDS DB by Protein ID:NP_001338077Link to BLAST:NP_001338077.1
Original member Current member NCBI NM_014796.2 NP_055611.1 Accepted alive Link to Nucleotide Sequence:NM_014796.2Link to Protein Sequence:NP_055611.1Re-query CCDS DB by Nucleotide ID:NM_014796Re-query CCDS DB by Protein ID:NP_055611Link to BLAST:NP_055611.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001248773.1 383 A2RU30-2 383 100% 0 0
NP_001338077.1 383 A2RU30-2 383 100% 0 0
NP_055611.1 383 A2RU30-2 383 100% 0 0

Chromosomal Locations for CCDS 58240.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 54961169 54961267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54962431 54963242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54963742 54963950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54966053 54966084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGACTGGGGGGACCAACAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGCAG
AAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTTCTCGGATACCCGCCCGATT
TTTCACCACCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATT
GAAATGGAAGACCCCTGCCTCATGCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACTGCTG
ATGCCTTCTTCTGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCCACATGTT
CTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCA
CCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCAC
CACCCCACAACACCCCCAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGA
AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCT
GAGGGTAAGAAGTTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGTGAAGAGGAAACACAGCAGAGGA
TGTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCT
GCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCC
ACCAATACGGAAACCCATCCAGCCAAGGATGAGACTTTCTGGAAAAGAAAGAGCAGAGCAAGAAAGAGCC
TCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAA
GCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAG
GAGGTGCAAAGCAACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCCACC
ACCACCAGACTTTTGCTGGCAAAGACTCGTGA

Translation (383 aa):
MTGGTNKTSSSISEILDKVQEDAEDVLFSLGFGQEDHKDTSRIPARFFTTPSQAKGIDFQLFLKSQVRRI
EMEDPCLMLASRFKQVQTLAVTADAFFCLYSYVSKTPVQKFTPSHMFWNCNHPTDVPSIRILSREPEPQS
PRDRLRKAISKMCLYTCPRDRPPPPHNTPKRNSLDQVVLEVMDKVKEEKQFLQQDSDLGQFSQEDPVPPA
EGKKLPTSPYPCVFCCEEETQQRMSTVLAPSQTLDSNPKVPCCTHSLPIEDPQWSTDPAQIRRELCSLPA
TNTETHPAKDETFWKRKSRARKSLFQKNLMGRKVKSLDLSITQQKWKQSVDRPELRRSLSQQPQDTFDLE
EVQSNSEEEQSQSRWPSRPRHPHHHQTFAGKDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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