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Report for CCDS58128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58128.1 Public Homo sapiens 11 LUZP2 24 110 108 CCDS HistoryNCBI Gene:338645Re-query CCDS DB by CCDS ID:58128.1Re-query CCDS DB by GeneID:338645See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533227.5 ENSP00000432952.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533227.5Link to Ensembl Protein Viewer:ENSP00000432952.1Re-query CCDS DB by Nucleotide ID:ENST00000533227Re-query CCDS DB by Protein ID:ENSP00000432952
Original member Current member EBI ENST00000620308.1 ENSP00000480441.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620308.1Link to Ensembl Protein Viewer:ENSP00000480441.1Re-query CCDS DB by Nucleotide ID:ENST00000620308Re-query CCDS DB by Protein ID:ENSP00000480441
Original member Current member NCBI NM_001252008.2 NP_001238937.1 Accepted alive Link to Nucleotide Sequence:NM_001252008.2Link to Protein Sequence:NP_001238937.1Re-query CCDS DB by Nucleotide ID:NM_001252008Re-query CCDS DB by Protein ID:NP_001238937Link to BLAST:NP_001238937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001238937.1 260 Q86TE4-4 260 100% 0 0

Chromosomal Locations for CCDS 58128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 24738228 24738302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 24763246 24763308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 24905991 24906053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 24914476 24914538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 24976591 24976665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 24983126 24983293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 25050038 25050130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 25077329 25077406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 25078554 25078658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (783 nt):
ATGAAGTCTCTTCAGGAGGCCCTGCAAAATCAGCTTAAGGAGACATCAGAGAAAGCAGAAAAACACCAGG
CTACTATTAATTTTTTAAAGACTGAAGTTGAAAGAAAGAGCAAAATGATCCGAGACCTCCAGAATGAGAA
TAAAAGCTTGAAAAACAAACTCTTGTCAGGAAACAAGCTCTGTGGCATTCACGCAGAAGAGTCAAAAAAA
ATCCAAGCCCAGCTGAAGGAGCTTCGTTATGGGAAGAAGGATTTATTATTTAAGGCGCAGCAGCTTACTG
ATCTGGAACAAAAATTAGCTGTAGCCAAAAATGAACTGGAGAAAGCAGCTCTTGACAGGGAGTCACAGAT
GAAAGCAATGAAAGAGACTGTGCAGCTCTGCTTGACATCTGTTTTCCGTGATCAGCCTCCTCCCCCTTTG
AGTTTAATCACATCAAATCCAACTCGGATGTTACTCCCACCCAGGAATATTGCCTCTAAGCTTCCAGATG
CAGCGGCCAAAAGCAAGCCTCAACAAAGTGCTTCTGGAAACAATGAGAGCTCTCAAGTTGAGTCAACAAA
GGAAGGAAATCCAAGTACCACTGCCTGTGACTCTCAAGATGAGGGCAGACCGTGTTCCATGAAGCACAAA
GAAAGTCCCCCAAGTAATGCCACTGCAGAAACCGAGCCTATCCCACAGAAATTGCAAATGCCTCCTTGCT
CTGAATGTGAGGTGAAAAAAGCCCCAGAAAAACCATTGACCAGCTTTGAAGGGATGGCAGCTAGAGAAGA
AAAAATACTGTAA

Translation (260 aa):
MKSLQEALQNQLKETSEKAEKHQATINFLKTEVERKSKMIRDLQNENKSLKNKLLSGNKLCGIHAEESKK
IQAQLKELRYGKKDLLFKAQQLTDLEQKLAVAKNELEKAALDRESQMKAMKETVQLCLTSVFRDQPPPPL
SLITSNPTRMLLPPRNIASKLPDAAAKSKPQQSASGNNESSQVESTKEGNPSTTACDSQDEGRPCSMKHK
ESPPSNATAETEPIPQKLQMPPCSECEVKKAPEKPLTSFEGMAAREEKIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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