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Report for CCDS57054.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57054.1 Public Mus musculus 17 Zfp994 23 108 98 CCDS HistoryNCBI Gene:240038Re-query CCDS DB by CCDS ID:57054.1Re-query CCDS DB by GeneID:240038See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57054.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000179996.2 ENSMUSP00000136105.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179996.2Link to Ensembl Protein Viewer:ENSMUSP00000136105.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179996Re-query CCDS DB by Protein ID:ENSMUSP00000136105
Original member NCBI NM_001205095.1 NP_001192024.1 Updated not alive Link to Nucleotide Sequence:NM_001205095.1Link to Protein Sequence:NP_001192024.1Re-query CCDS DB by Nucleotide ID:NM_001205095Re-query CCDS DB by Protein ID:NP_001192024
Current member NCBI NM_001205095.2 NP_001192024.1 Accepted alive Link to Nucleotide Sequence:NM_001205095.2Link to Protein Sequence:NP_001192024.1Re-query CCDS DB by Nucleotide ID:NM_001205095Re-query CCDS DB by Protein ID:NP_001192024Link to BLAST:NP_001192024.1

Chromosomal Locations for CCDS 57054.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 22199981 22201809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 22202676 22202802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 22205305 22205334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1986 nt):
ATGAATGCTTCTCTCCTAAATGCTCCTCAGGGTCAGTTAACGTTCAAGGATGTGGCTGTGGACTTCTCAC
AGGAGGAATGGCAATGTCTTGACTGTGCTCAGCAGGCATTGTACATGGATGTGATGTTGGAGAATTACAA
TAATCTGTTTTTTGTGGAGAATCATTGCATGTGTCCTAAATTTGAGAAGATGTTGGATCAAGACCTACAG
CATATTGTCCTCGAACATGTAAATACCCAAGTGAAATCTTATGAATGTCATGAGCTTGACAAGATCATCC
ATGAGTTCACCGGAAGTACACCTTATAAAACTAACCTCAGGGCTACATCTGTTGAATCATCAAACCTAAA
CAGACATGAAACTGAAAACAACAGAGAACCTTGCAAATATGAAAACCATGTAAACTGTTTCAATTTGTGC
TCTACCATTAGTCTAAATCAAGGAATCAACATAGGAAAGAAAGAATACAATGGTGCAAAGCTTGATAAGG
TTTTTGACTCTAAAGAAATCCTCATGTTGAAACAAACCAAAAGTGTAAAGAAACCTTACAAATGTAGTGA
ATGTGCCAAATGTTTTGCCAAGAAATGCTGGTTTAGAAAACATCAGACAACTCATACAGGAGAAAAATTT
TACAAATGTAATGAATGTGACAAATCCTTTACCCAAAAAGGCAGTCTTAGTATTCATCAGAAGTATCATA
CAGGAAAGAAACCTTACAAATGTAGTGAATGTGAGAAATGCTTCATTCAAGTTGGTGATCTTAGAAGACA
TCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAATGAATGTGAAAAATGCTTTAGCTACAAAAGC
AGCCTTAGAACTCATCAGAGAATTCATACAGGAGAGAAGCCTTACAAATGTAGTGAATGTGACAAATGCT
TTTCCCACAAAGGCAGTCTTAGTATTCATCTGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGA
ATGTGACAAAAGCTTTACCCAAAAAGGCAGTCTTAGTATTCATCAGAGAATTCATGCAGGAGAGAAACCT
TACAGATGTAGTGAATGTGACAAAGGCTTTACTCTAAAATGCAGTCTTATCATTCATCAAATAATTCATA
CAGGAGAGAAAGCTTACAAATGTAGTGAATGTGACAAATGCTTTTCCCTCAAAAGTGATCTTAGTATTCA
TCAAAGAATTCATACAGGAGAAAAACTTTATAGATGTAGTGAGTGTGATAAATGCTTTACAAAGAAATAT
CGTCTTAGAAGTCATCAGACAATTCATACAGGAGAGAAACCTTACAAGTGCAGTGAATGTGACAAATCTT
TTACCCTGAAAGGCCATCTTAGAATTCATCAACGAATTCATACAGGAGAGAAACCTTACAAATGTAATGA
ATGTGACAAATGCTTTACTCAAAAATGCAGTCTTATTATTCATCACAGAATTCATGCCGGAGAAAAACCC
TACAAATGTAGTGAATGTGACAAATACTACACTCGAAAAAGCCATCTTATTGTTCATCAGCGCATTCACA
TAGGAGAAAAACCTTACAAATGCAGTGAATGTAACAAATGCTTTACCAACAAATATTGTCTTAGAACTCA
TCAGAGAATACATTCAGCTAATAAGCCTTACAAATGTAGTGAATGTGACAAATCTTTTGCCCTGAATGCC
AGGCTCAGGTGTCATCGGATTATTCATACAGGAGAAAAACCATACAAATGTAGTAAATGTGGCAAATACT
TTACCCAAAAAGGAAGTCTTATAATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGA
ATGTGACAAGTACTTTACCCGAAAAAGCAGTCTTAATGTGCACCAGAGAGTTCATACAGGAGAGAAACCT
TACAAATGTAGTGAATGTGACAAATGCTTTTCCCATAAAGGTGATCTTAGAAAACATCAGAGAATTCATA
CAGGAGAAAGAACCTTACAGATATGA

Translation (661 aa):
MNASLLNAPQGQLTFKDVAVDFSQEEWQCLDCAQQALYMDVMLENYNNLFFVENHCMCPKFEKMLDQDLQ
HIVLEHVNTQVKSYECHELDKIIHEFTGSTPYKTNLRATSVESSNLNRHETENNREPCKYENHVNCFNLC
STISLNQGINIGKKEYNGAKLDKVFDSKEILMLKQTKSVKKPYKCSECAKCFAKKCWFRKHQTTHTGEKF
YKCNECDKSFTQKGSLSIHQKYHTGKKPYKCSECEKCFIQVGDLRRHQRIHTGEKPYKCNECEKCFSYKS
SLRTHQRIHTGEKPYKCSECDKCFSHKGSLSIHLRIHTGEKPYKCSECDKSFTQKGSLSIHQRIHAGEKP
YRCSECDKGFTLKCSLIIHQIIHTGEKAYKCSECDKCFSLKSDLSIHQRIHTGEKLYRCSECDKCFTKKY
RLRSHQTIHTGEKPYKCSECDKSFTLKGHLRIHQRIHTGEKPYKCNECDKCFTQKCSLIIHHRIHAGEKP
YKCSECDKYYTRKSHLIVHQRIHIGEKPYKCSECNKCFTNKYCLRTHQRIHSANKPYKCSECDKSFALNA
RLRCHRIIHTGEKPYKCSKCGKYFTQKGSLIIHQRIHTGEKPYKCSECDKYFTRKSSLNVHQRVHTGEKP
YKCSECDKCFSHKGDLRKHQRIHTGERTLQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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