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Report for CCDS55945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55945.1 Public Homo sapiens 14 WDR20 24 110 108 CCDS HistoryNCBI Gene:91833Re-query CCDS DB by CCDS ID:55945.1Re-query CCDS DB by GeneID:91833See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55945.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000556807.1 ENSP00000450636.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000556807.1Link to Ensembl Protein Viewer:ENSP00000450636.1Re-query CCDS DB by Nucleotide ID:ENST00000556807Re-query CCDS DB by Protein ID:ENSP00000450636
Original member Current member NCBI NM_001242416.2 NP_001229345.1 Accepted alive Link to Nucleotide Sequence:NM_001242416.2Link to Protein Sequence:NP_001229345.1Re-query CCDS DB by Nucleotide ID:NM_001242416Re-query CCDS DB by Protein ID:NP_001229345Link to BLAST:NP_001229345.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229345.1 520 Q8TBZ3-6 520 100% 0 0

Chromosomal Locations for CCDS 55945.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102139924 102140172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102208603 102209862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102222830 102222883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGT
ACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCC
TGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGC
CGGGAGCTGTACTTCTATATCTACAAGGGGGTCCGCAAGAGACTAATAGACAAGTCACGAGTTACCTGTG
TCAAATGGGTTCCCGGTTCGGAAAGCCTTTTCCTAGTAGCCCACTCGAGTGGGAACATGTACTTATATAA
TGTGGAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTTCTGAAGCAGGGAGAGAGCTTTGCCGTG
CACACTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGACGGTGGGCGAGGGGGCCCTCAACG
AGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGCGTGAGCCAGGACGGGTTTCTGCGGGTGTTCAA
CTTTGACTCAGTGGAGCTGCACGGTACGATGAAAAGCTACTTTGGGGGCTTGCTGTGTGTGTGCTGGAGC
CCGGATGGCAAGTACATCGTGACAGGTGGGGAGGACGACTTGGTGACAGTCTGGTCCTTTGTAGACTGCC
GAGTAATAGCCAGAGGCCACGGGCACAAGTCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATACCACTAG
TGTAGAAGAAGGTGACCCTATGGAGTTTAGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTTGGC
AGAGATCGAGCAAATAGTACACAGTCCAGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTG
TCACGTATCGGTTTGGTTCCGTGGGCCAGGACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCT
TTTCCCTCACCAACCCCTCTCAAGAGCAAGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCT
GGAAGCAATGGGAACAGTGTTACAACACCCGGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCC
TTCCACATTCAGCAGTCTCAAATGCTGGCAGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGT
CAGCAAATTTGCAACACTTTCACTACATGACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAAT
CATAGCATGGGACACATTTCTAGCAAGAGCAGTGACAAACTGAATCTAGTTACCAAAACCAAAACGGACC
CTGCTAAAACTCTGGGAACGCCCCTGTGTCCTCGAATGGAAGATGTTCCCTTGTTAGAGCCGCTGATATG
TAAAAAGATAGCACATGAGAGACTGACTGTACTAATATTTCTTGAAGACTGTATAGTCACTGCTTGTCAG
GAGGGATTTATTTGCACATGGGGAAGGCCTGGTAAAGTGGGCTCATTGTCATCCCCAAGCCAGGCCAGTT
CTCCAGGTGGAACTGTAGTGTAG

Translation (520 aa):
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVG
RELYFYIYKGVRKRLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAV
HTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWS
PDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFG
RDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPA
GSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRN
HSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQ
EGFICTWGRPGKVGSLSSPSQASSPGGTVV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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