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Report for CCDS55683.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55683.1 Public Homo sapiens 1 INTS7 24 110 108 CCDS HistoryNCBI Gene:25896Re-query CCDS DB by CCDS ID:55683.1Re-query CCDS DB by GeneID:25896See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55683.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440600.6 ENSP00000388908.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440600.6Link to Ensembl Protein Viewer:ENSP00000388908.2Re-query CCDS DB by Nucleotide ID:ENST00000440600Re-query CCDS DB by Protein ID:ENSP00000388908
Original member Current member NCBI NM_001199809.2 NP_001186738.1 Accepted alive Link to Nucleotide Sequence:NM_001199809.2Link to Protein Sequence:NP_001186738.1Re-query CCDS DB by Nucleotide ID:NM_001199809Re-query CCDS DB by Protein ID:NP_001186738Link to BLAST:NP_001186738.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186738.1 913 Q9NVH2-4 913 100% 0 0

Chromosomal Locations for CCDS 55683.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 211941824 211942111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211944784 211944969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211946607 211946705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211952569 211952701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211966430 211966498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211967878 211967981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211968513 211968707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211975166 211975372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211976582 211976719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211978272 211978511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211981093 211981190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211982676 211982810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 211987886 211988003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212006639 212006761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212007250 212007449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212011375 212011421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212016886 212017023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212021083 212021212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212035344 212035437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2742 nt):
ATGGCGTCAAACTCAACTAAGTCTTTCCTGGCAGATGCCGGCTATGGCGAACAGGAACTGGATGCCAACT
CTGCCCTTATGGAATTGGACAAAGGCCTAAGATCTGGCAAACTTGGTGAACAGTGTGAAGCAGTTGTTCG
CTTTCCCAGACTTTTTCAGAAGTATCCATTCCCTATTCTTATCAATTCTGCATTCCTAAAGTTAGCTGAT
GTTTTCAGAGTTGGGATGTTGGGAAGTCTGGCATCAATAATTCCTGAGAGGAAGAATGCTCATCATAGTA
TTCGTCAGAGTTTAGATTCACATGATAATGTAGAAGTTGAAGCTGCTGTTTTTGCTGCTGCAAACTTCTC
TGCACAGTCAAAGGATTTTGCTGTAGGAATCTGTAACAAAATCAGTGAAATGATTCAAGGTTTAGCGACA
CCAGTAGACTTGAAGCTAAAATTGATACCCATTCTACAGCACATGCACCATGATGCAATCTTGGCTTCCA
GTGCTCGTCAGCTTTTACAACAGCTGGTCACATCCTATCCGTCCACCAAAATGGTGATTGTGTCTTTGCA
CACTTTCACTCTGCTTGCAGCGTCATCTTTGGTTGATACACCTAAGCAGATTCAGCTTCTGTTGCAGTAT
TTGAAGAATGATCCCAGGAAGGCAGTAAAGAGACTTGCTATTCAAGATCTGAAATTACTTGCTAATAAAA
CACCACATACTTGGAGTAGGGAGAATATTCAGGCACTTTGTGAGTGTGCCCTCCAGACTCCTTATGACAG
CTTAAAACTAGGGATGTTGTCTGTCCTTTCCACACTATCAGGGACCATCGCCATCAAACATTACTTCAGT
ATAGTTCCAGGAAATGTGAGTTCTTCTCCCAGATCTTCTGATTTAGTCAAATTAGCCCAAGAGTGCTGTT
ACCATAATAACAGGGGCATTGCAGCTCATGGAGTTAGAGTCCTAACTAATATAACTGTTTCTTGTCAAGA
AAAGGATCTTTTGGCACTGGAACAAGATGCTGTCTTTGGCCTGGAATCCCTACTGGTACTTTGTAGTCAA
GATGATAGTCCAGGTGCTCAGGCCACTTTAAAGATTGCTCTAAACTGTATGGTGAAGTTGGCCAAGGGCA
GGCCCCATCTTAGCCAGTCAGTAGTTGAGACCTTGTTGACTCAATTGCACAGTGCTCAAGACGCTGCCCG
GATTTTGATGTGCCATTGCCTGGCAGCCATTGCCATGCAACTGCCGGTGCTGGGTGATGGGATGCTTGGT
GACCTCATGGAGCTGTACAAGGTGATTGGACGATCAGCCACAGACAAGCAACAAGAACTTCTGGTGAGTT
TGGCTACTGTGATTTTTGTTGCAAGTCAGAAGGCATTGTCTGTGGAAAGTAAGGCAGTAATTAAGCAGCA
GCTTGAAAGTGTCTCCAATGGATGGACTGTATACCGTATTGCCAGACAGGCTTCCAGAATGGGTAATCAT
GACATGGCCAAAGAGCTTTATCAGAGTTTGCTGACTCAGGTTGCCTCAGAACATTTCTACTTCTGGCTAA
ATAGTTTGAAGGAGTTTTCACATGCAGAACAGTGTCTCACTGGGTTGCAAGAGGAAAATTATAGTTCAGC
ACTTTCTTGCATTGCTGAATCTTTAAAATTCTATCACAAAGGGATTGCTTCCTTAACAGCAGCTAGTACA
CCACTGAATCCTTTAAGCTTTCAGTGTGAATTTGTAAAACTCAGGATTGACCTTTTACAAGCCTTCTCTC
AACTTATCTGTACTTGTAATAGCCTGAAGACAAGCCCACCACCTGCAATTGCCACAACAATTGCCATGAC
CTTAGGAAATGACCTCCAGAGGTGTGGTCGCATCTCCAATCAGATGAAACAGTCCATGGAAGAATTTCGA
AGCCTTGCTTCTCGATATGGAGATCTTTACCAGGCATCTTTTGATGCTGACTCAGCAACTTTGAGGAATG
TTGAACTACAGCAGCAGAGCTGTTTACTGATATCTCATGCAATAGAAGCCCTGATTTTGGATCCAGAATC
AGCAAGTTTCCAGGAATATGGATCTACTGGAACAGCCCATGCTGATAGTGAATATGAAAGAAGAATGATG
TCTGTATATAATCATGTCTTGGAGGAGGTAGAATCACTCAATCGGAAATATACCCCTGTTTCTTATATGC
ACACAGCATGCCTCTGCAATGCCATCATTGCTTTGCTGAAAGTTCCCCTTTCTTTCCAGAGATATTTTTT
CCAGAAACTACAGTCTACCAGCATCAAGCTTGCTCTGTCACCATCGCCCCGGAATCCTGCAGAGCCCATT
GCTGTCCAGAATAACCAGCAGCTGGCGCTAAAGGTAGAGGGAGTGGTTCAGCACGGATCTAAACCAGGAC
TCTTCCGCAAAATTCAGTCTGTCTGTCTGAATGTTTCTTCCACACTGCAGAGTAAATCTGGACAAGACTA
CAAGATACCCATTGACAACATGACCAATGAGATGGAGCAAAGGGTTGAACCTCATAATGATTACTTCAGT
ACTCAATTTCTGTTGAACTTTGCTATCCTTGGAACACACAACATTACAGTGGAATCTTCTGTGAAAGATG
CCAATGGTATAGTATGGAAGACTGGTCCCAGAACTACCATATTTGTAAAATCCCTGGAAGACCCTTATTC
CCAGCAAATTCGCTTACAACAGCAGCAAGCCCAGCAGCCATTACAGCAGCAGCAGCAACGCAATGCCTAC
ACACGGTTTTAA

Translation (913 aa):
MASNSTKSFLADAGYGEQELDANSALMELDKGLRSGKLGEQCEAVVRFPRLFQKYPFPILINSAFLKLAD
VFRVGMLGSLASIIPERKNAHHSIRQSLDSHDNVEVEAAVFAAANFSAQSKDFAVGICNKISEMIQGLAT
PVDLKLKLIPILQHMHHDAILASSARQLLQQLVTSYPSTKMVIVSLHTFTLLAASSLVDTPKQIQLLLQY
LKNDPRKAVKRLAIQDLKLLANKTPHTWSRENIQALCECALQTPYDSLKLGMLSVLSTLSGTIAIKHYFS
IVPGNVSSSPRSSDLVKLAQECCYHNNRGIAAHGVRVLTNITVSCQEKDLLALEQDAVFGLESLLVLCSQ
DDSPGAQATLKIALNCMVKLAKGRPHLSQSVVETLLTQLHSAQDAARILMCHCLAAIAMQLPVLGDGMLG
DLMELYKVIGRSATDKQQELLVSLATVIFVASQKALSVESKAVIKQQLESVSNGWTVYRIARQASRMGNH
DMAKELYQSLLTQVASEHFYFWLNSLKEFSHAEQCLTGLQEENYSSALSCIAESLKFYHKGIASLTAAST
PLNPLSFQCEFVKLRIDLLQAFSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGRISNQMKQSMEEFR
SLASRYGDLYQASFDADSATLRNVELQQQSCLLISHAIEALILDPESASFQEYGSTGTAHADSEYERRMM
SVYNHVLEEVESLNRKYTPVSYMHTACLCNAIIALLKVPLSFQRYFFQKLQSTSIKLALSPSPRNPAEPI
AVQNNQQLALKVEGVVQHGSKPGLFRKIQSVCLNVSSTLQSKSGQDYKIPIDNMTNEMEQRVEPHNDYFS
TQFLLNFAILGTHNITVESSVKDANGIVWKTGPRTTIFVKSLEDPYSQQIRLQQQQAQQPLQQQQQRNAY
TRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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