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Report for CCDS55597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55597.1 Public Homo sapiens 1 NASP 24 110 108 CCDS HistoryNCBI Gene:4678Re-query CCDS DB by CCDS ID:55597.1Re-query CCDS DB by GeneID:4678See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55597.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537798.5 ENSP00000438871.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537798.5Link to Ensembl Protein Viewer:ENSP00000438871.1Re-query CCDS DB by Nucleotide ID:ENST00000537798Re-query CCDS DB by Protein ID:ENSP00000438871
Original member Current member NCBI NM_001195193.2 NP_001182122.1 Accepted alive Link to Nucleotide Sequence:NM_001195193.2Link to Protein Sequence:NP_001182122.1Re-query CCDS DB by Nucleotide ID:NM_001195193Re-query CCDS DB by Protein ID:NP_001182122Link to BLAST:NP_001182122.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182122.1 724 P49321-4 724 100% 0 0

Chromosomal Locations for CCDS 55597.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 45584147 45584205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45591223 45591270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45606482 45606591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45607321 45608337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45613169 45613248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45614096 45614181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45614293 45614366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45615013 45615201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45615305 45615471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45616337 45616393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45616626 45616703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45617463 45617591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45618061 45618141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2175 nt):
ATGGCCATGGAGTCCACAGCCACTGCCGCCGTCGCCGCGGAGCTGGTTTCTGCCGACAAAATTGAAGATG
TTCCTGCTCCTTCTACATCTGCAGATAAAGTGGAGAGAATGGAGAATGGTGTGTTGGGAAACGCCTTGGA
AGGTGTGCATGTGGAAGAGGAAGAAGGAGAAAAAACAGAAGATGAATCTCTGGTAGAAAATAATGATAAC
ATAGATGAGGAAGCAAGGGAAGAGTTGAGAGAACAGGTTTATGACGCCATGGGAGAAAAAGAAGAAGCCA
AAAAAACAGAAGACAAGTCTTTGGCAAAGCCTGAAACTGATAAAGAACAGGACAGTGAAATGGAGAAGGG
TGGAAGAGAAGATATGGATATAAGTAAATCTGCAGAGGAGCCACAGGAAAAAGTTGACTTGACTCTAGAT
TGGTTAACTGAAACCTCTGAAGAGGCAAAAGGAGGAGCAGCACCAGAAGGACCGAATGAAGCTGAGGTCA
CTTCTGGGAAGCCAGAACAGGAAGTACCAGATGCTGAGGAAGAAAAATCAGTTTCTGGAACTGATGTCCA
AGAAGAGTGCAGAGAAAAAGGAGGTCAGGAGAAGCAGGGAGAGGTAATTGTGAGCATAGAGGAGAAGCCA
AAAGAAGTTTCAGAAGAGCAGCCTGTGGTGACTCTAGAAAAGCAGGGCACTGCAGTGGAGGTAGAAGCAG
AGTCTTTAGACCCGACAGTCAAGCCAGTGGATGTGGGTGGGGACGAGCCAGAGGAGAAGGTAGTTACCTC
TGAAAACGAGGCAGGAAAGGCGGTTCTTGAACAACTGGTAGGTCAAGAAGTACCACCTGCTGAAGAGTCA
CCAGAGGTGACAACAGAGGCTGCAGAGGCCTCAGCTGTAGAGGCTGGATCAGAAGTCTCTGAAAAGCCTG
GGCAGGAGGCTCCAGTTCTCCCTAAGGATGGTGCAGTCAATGGACCGTCAGTTGTAGGAGATCAGACTCC
TATTGAACCACAGACTTCTATAGAAAGACTGACAGAAACAAAAGATGGCTCAGGACTAGAGGAGAAGGTC
AGGGCAAAGCTGGTTCCTAGTCAGGAGGAGACTAAGCTGTCTGTAGAAGAGTCTGAGGCAGCTGGAGATG
GGGTTGATACCAAGGTAGCCCAGGGAGCTACTGAGAAATCACCTGAAGACAAAGTTCAGATAGCTGCTAA
TGAAGAGACACAAGAGAGAGAAGAACAGATGAAAGAGGGTGAAGAAACTGAAGGCTCAGAAGAGGATGAT
AAAGAAAATGATAAGACCGAAGAAATGCCAAATGATTCAGTCCTTGAAAACAAGTCTCTTCAAGAAAATG
AGGAGGAGGAGATTGGGAACCTAGAGCTTGCCTGGGATATGCTGGATTTAGCAAAGATCATTTTTAAAAG
GCAAGAAACAAAAGAAGCACAGCTTTATGCTGCCCAGGCACATCTTAAACTCGGAGAAGTTAGTGTTGAA
TCTGAAAACTATGTGCAAGCTGTGGAGGAGTTCCAGTCCTGCCTTAACCTGCAGGAACAGTACCTGGAAG
CCCACGACCGTCTCCTTGCAGAGACCCACTACCAGCTGGGCTTGGCTTATGGGTACAACTCTCAGTATGA
TGAGGCAGTGGCACAGTTCAGCAAATCTATTGAAGTCATTGAGAACAGAATGGCTGTACTAAACGAGCAG
GTGAAGGAGGCTGAAGGATCGTCTGCTGAATACAAGAAAGAAATTGAGGAACTAAAGGAACTGCTACCCG
AAATTAGAGAGAAGATAGAAGATGCAAAGGAGTCTCAGCGTAGTGGGAATGTAGCTGAACTGGCTCTGAA
AGCTACTCTGGTGGAGAGTTCTACTTCAGGTTTCACTCCTGGTGGAGGAGGCTCTTCAGTCTCCATGATT
GCCAGTAGAAAGCCAACAGACGGTGCTTCCTCATCAAATTGTGTGACTGATATTTCCCACCTTGTCAGAA
AGAAGAGGAAACCAGAGGAAGAGAGTCCCCGGAAAGATGATGCAAAGAAAGCCAAACAAGAGCCGGAGGT
GAACGGAGGCAGTGGGGATGCTGTCCCCAGTGGAAATGAAGTTTCGGAAAACATGGAGGAGGAGGCTGAG
AATCAGGCTGAAAGCCGGGCAGCAGTGGAGGGGACAGTGGAGGCTGGAGCTACAGTTGAAAGCACTGCAT
GTTAA

Translation (724 aa):
MAMESTATAAVAAELVSADKIEDVPAPSTSADKVERMENGVLGNALEGVHVEEEEGEKTEDESLVENNDN
IDEEAREELREQVYDAMGEKEEAKKTEDKSLAKPETDKEQDSEMEKGGREDMDISKSAEEPQEKVDLTLD
WLTETSEEAKGGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREKGGQEKQGEVIVSIEEKP
KEVSEEQPVVTLEKQGTAVEVEAESLDPTVKPVDVGGDEPEEKVVTSENEAGKAVLEQLVGQEVPPAEES
PEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGPSVVGDQTPIEPQTSIERLTETKDGSGLEEKV
RAKLVPSQEETKLSVEESEAAGDGVDTKVAQGATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDD
KENDKTEEMPNDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVE
SENYVQAVEEFQSCLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQ
VKEAEGSSAEYKKEIEELKELLPEIREKIEDAKESQRSGNVAELALKATLVESSTSGFTPGGGGSSVSMI
ASRKPTDGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVPSGNEVSENMEEEAE
NQAESRAAVEGTVEAGATVESTAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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