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Report for CCDS55225.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55225.1 Public Homo sapiens 8 ADAM18 24 110 108 CCDS HistoryNCBI Gene:8749Re-query CCDS DB by CCDS ID:55225.1Re-query CCDS DB by GeneID:8749See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55225.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520772.5 ENSP00000429908.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520772.5Link to Ensembl Protein Viewer:ENSP00000429908.1Re-query CCDS DB by Nucleotide ID:ENST00000520772Re-query CCDS DB by Protein ID:ENSP00000429908
Original member Current member NCBI NM_001190956.2 NP_001177885.1 Accepted alive Link to Nucleotide Sequence:NM_001190956.2Link to Protein Sequence:NP_001177885.1Re-query CCDS DB by Nucleotide ID:NM_001190956Re-query CCDS DB by Protein ID:NP_001177885Link to BLAST:NP_001177885.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177885.1 182 Q9Y3Q7-3 182 100% 0 0

Chromosomal Locations for CCDS 55225.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 39584623 39584677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 39585276 39585352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 39606307 39606362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 39609042 39609120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 39609485 39609561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 39610529 39610733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGTTCCTTCTCCTCGCCCTCCTCACTGAGCTTGGAAGACTGCAAGCCCACGAAGGTTCTGAAGGAATAT
TTCTGCATGTCACAGTTCCACGGAAGATTAAGTCAAATGACAGTGAAGTTTCAGAGAGGAAGATGATTTA
CATCATTACAATTGATGGACAACCTTACACTCTACATCTCGGAAAACAATCATTCTTACCCCAGAACTTT
TTGGTTTATACATATAATGAAACTGGATCTTTGCATTCTGTGTCTCCATATTTTATGATGCATTGCCATT
ACCAAGGATATGCTGCCGAATTTCCAAATTCATTTGTGACACTCAGTATATGTTCTGGTCTCAGGGGATT
TCTCCAGTTTGAAAATATCAGTTATGGAATTGAACCAGTAGAATCTTCAGCAAGATTTGAGCATATAATT
TATCAAATGAAAAATAATGATCCAAATGTATCCATTTTAGCAGTAAATTACAGTCATATTTGGCAGAAAG
ACCAGCCCTACAAAGTTCCTTTAAACTCACAGGTGACTGTCATCATTCTGATGTTATGA

Translation (182 aa):
MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHLGKQSFLPQNF
LVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQFENISYGIEPVESSARFEHII
YQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIILML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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