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Report for CCDS51725.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51725.1 Public Mus musculus 6 Fezf1 23 108 98 CCDS HistoryNCBI Gene:73191Re-query CCDS DB by CCDS ID:51725.1Re-query CCDS DB by GeneID:73191See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51725.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031709.6 ENSMUSP00000031709.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031709.6Link to Ensembl Protein Viewer:ENSMUSP00000031709.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000031709Re-query CCDS DB by Protein ID:ENSMUSP00000031709
Original member Current member NCBI NM_028462.1 NP_082738.1 Accepted alive Link to Nucleotide Sequence:NM_028462.1Link to Protein Sequence:NP_082738.1Re-query CCDS DB by Nucleotide ID:NM_028462Re-query CCDS DB by Protein ID:NP_082738Link to BLAST:NP_082738.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082738.1 475 Q0VDQ9 475 100% 0 0

Chromosomal Locations for CCDS 51725.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 23245737 23246095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 23246515 23246647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 23246896 23247030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 23247274 23248074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGGACAGTAGCTGCCTCAACGCGACCACCAAAATGCTAGCGACTGCTCCAGCTCGGGGCAACGTGATGA
GCACATCTAAACCCTTGGCTTTCTCCATCGAACGAATCATGGCGCGCACCCCTGAGCCTAAGGCCCTGCC
GGTCCCCCACTTCCTGCAGGGAGCCGTGCCCAAAGGGGACCCCAAGCACTCTCTGCATCTCAACTCGTCG
ATCCCCTGCATGATCCCTTTCGTCCCCGTGGCGTACGACACGAACTCCAAAGCGGGAGTGAATGGCTCAG
AGCCCCGCAAGGCGAGTTTGGAGGTTCCGGCGCCGCCCGCGGTGGCGCCCTCTGCGCCGGCGTTCAGCTG
CAGCGACCTGCTCAACTGCGCGCTAAGTCTTAAGGGCGACCTGGCCCGCGACGCATTGCCACTACAGCAG
TACAAGCTGGTAAGGCCGCGTGTGGTCAACCACTCTTCGTTTCACGCCATGGGTGCCCTGTGCTACCTGA
ACCGAGGTGACGGCCCGTGCCACCCGGCTGCGAGCGTGAACATCCACCCGGTGGCCTCCTACTTTCTCAG
TTCCCCTTTGCACCCACAGCCCAAAACGTATTTAGCCGAAAGGAATAAACTGGTTGTACCGGCAGTGGAG
AAACTCCCTTCGGGAGTAGCTTTCAAAGACCTGTCCCAGGCTCAGCTGCAGCATTACATGAAAGAAAGCG
CCCAACTTTTGTCGGAAAAAATCGCTTTCAAAACCTCGGATTTCAGCCGCGGCTCTCCAAATGCCAAGCC
CAAAGTTTTCACTTGTGAAGTCTGCGGCAAGGTCTTTAATGCGCACTATAACTTAACCCGTCACATGCCG
GTACACACAGGAGCCAGACCCTTCGTGTGTAAAGTGTGTGGGAAAGGTTTCCGGCAAGCTAGCACCCTTT
GCCGGCATAAGATCATTCACACACAGGAGAAACCTCACAAGTGCAACCAGTGCGGTAAAGCATTTAACAG
AAGTTCCACGTTAAACACACATACCCGAATTCACGCGGGCTACAAACCATTCGTGTGTGAATTCTGCGGC
AAAGGATTTCATCAAAAAGGGAATTACAAAAATCACAAGTTAACCCACAGCGGGGAGAAACAGTTCAAGT
GCAATATCTGCAACAAGGCTTTCCACCAGGTGTACAACCTCACCTTCCACATGCACACTCACAACGACAA
GAAGCCTTTCACCTGCCCCACGTGTGGCAAGGGCTTTTGTAGGAACTTTGACCTCAAGAAGCACGTCCGC
AAGCTACACGACAGCAGCCTGGGGCTGACCCGCACTCCTACTGGGGAGCCAAGCAGCGATCCGCCGCCCC
AGCTGCAACAGCCGCCGCCTGCGCCTCTGCCGCCACTGCAGCCTACATTGCCGCCTCCCGGGCCTCTGCC
ATCCGGGCTTCACCAAGGCCACCAGTGA

Translation (475 aa):
MDSSCLNATTKMLATAPARGNVMSTSKPLAFSIERIMARTPEPKALPVPHFLQGAVPKGDPKHSLHLNSS
IPCMIPFVPVAYDTNSKAGVNGSEPRKASLEVPAPPAVAPSAPAFSCSDLLNCALSLKGDLARDALPLQQ
YKLVRPRVVNHSSFHAMGALCYLNRGDGPCHPAASVNIHPVASYFLSSPLHPQPKTYLAERNKLVVPAVE
KLPSGVAFKDLSQAQLQHYMKESAQLLSEKIAFKTSDFSRGSPNAKPKVFTCEVCGKVFNAHYNLTRHMP
VHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHTRIHAGYKPFVCEFCG
KGFHQKGNYKNHKLTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKKPFTCPTCGKGFCRNFDLKKHVR
KLHDSSLGLTRTPTGEPSSDPPPQLQQPPPAPLPPLQPTLPPPGPLPSGLHQGHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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