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Report for CCDS50359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50359.1 Public Mus musculus 19 Ehbp1l1 23 108 98 CCDS HistoryNCBI Gene:114601Re-query CCDS DB by CCDS ID:50359.1Re-query CCDS DB by GeneID:114601See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50359.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049295.14 ENSMUSP00000037656.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049295.14Link to Ensembl Protein Viewer:ENSMUSP00000037656.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000049295Re-query CCDS DB by Protein ID:ENSMUSP00000037656
Original member Current member NCBI NM_001114597.1 NP_001108069.1 Accepted alive Link to Nucleotide Sequence:NM_001114597.1Link to Protein Sequence:NP_001108069.1Re-query CCDS DB by Nucleotide ID:NM_001114597Re-query CCDS DB by Protein ID:NP_001108069Link to BLAST:NP_001108069.1

Chromosomal Locations for CCDS 50359.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5708326 5708425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5708556 5708670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5708758 5708831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710211 5710310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710574 5710697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710793 5710848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710969 5711038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5715796 5716494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5716896 5716944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5717039 5717196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5717662 5720407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5720564 5720726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5720809 5720877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5721442 5721584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5721667 5721845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5721957 5722010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5722646 5722741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5722950 5723007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5725917 5726020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5157 nt):
ATGACTTCAGTGTGGAAGCGCCTGCAGCGGGTTGGCAAGCGGGCCGCCAAGTTCCAGTTTGTGGCGTGTT
ACCATGAACTGGTGTTGGAGTGCACCAAGAAGTGGCAGCCTGACAAGCTGGTGGTGGTATGGACTCGGCG
GAACCGAAGGATCTGCTCCAAGGCCCACAGCTGGCAGCCTGGCATCCAGAACCCATACCGTGGCACCGTG
GTATGGATGGTTCCTGAGAACGTGGACATCTCGGTGACCTTGTACAGGGACCCTCATGTGGACCAGTATG
AAACCAAAGAGTGGACTTTTATTATTGAAAATGAGTCCAAGGGACAGCGGAAGGTACTGGCCACAGTTGA
TGTGAACCTAGCCCACCATGCAGGGCCTGTGCCTGCTCAGGTTCCACTTCGACTGCGGCTGAAGCCCAAA
TCTGTGAAGGTGGTGCATGCCGAACTGAGCCTCACCCTTTCTGGGGTGCTGCTGCGAGAAGGCCGTGCCA
CGGATGATGACATGCAGAGTCTGGCCAGCCTCATGAGTGTGAAGCCTAGTGACGTGGGAAACCTGGATGA
CTTTGCTGAGAGTGATGAGGAGGAAGCTAATGGCCCTGGGGCTCCTGAGGTCCGGACTCGAGGCCCCCAG
TCAGATCTGTCTCGAGAGCTGAAGACACTCTGTGAAGAAGAAGATGAAGGCCACATACGGCCCCAGCAGG
CAGCTGCCAGACCCTCTAGTGCTGAAGACACCAGCCCTGCCCCAGTGAGTGCCCCTGCACCCCCGGTCAG
GGCCTTCCGGGGCCAGGGGTCAGAACCAGCTGCTATAACCGGGGGCCAGGTGGGGCCTGAAACCCCAGAG
CCCCCGCCATCCCCACCAGAGACAAGGTCCACTGGGCAGCCAGGCCAGACCATGGTCCCCACCCCAGCCC
CTCGGCTCCGGAAAGGCTCTGATGCACCCTCGTCCCCAGTCCCCTGCAGTGGGGATGAGGTCCCCAATAC
CTCAGAGGATCCTCCAACAGGAATGGGCTCTTCTGGGGAGACCCAGGCTCAGATAAGCTCTCAGGAAGGG
ACAGAGGCCCATGAAGCCAGGCCAGAACCAGACATTGAGGTCAGAGGCTCCAAAGATTCTCTGGGAGGAG
AAAGATCCAAAGTTGAAGAGGAGGACACTGGGGACAGGCCGGGGGCTAGTGGGGCAGGGAATAGAGAGAA
GAACACTAAGAAGTCGGACACCACAGCCGGCGAGGCTGGAGAGAGCTCAGAACTTCATCAAGTAGATGCT
GAGCACAAGTCAAAGGTTCAACACAGAGCCACAGAGGGACCAGAGGCTGCAGGGCCGACGCCCAAGGCAA
GGCTTGGGGACACTCCTGAGGCCCCTCCTAGGAGTGCTCAGAGGAGGATGGGGGTTAGGACCCAGGAAGA
GGCTCCCAGTGACCTGAACCCACCTCCAGCTGAGCCTGAAGAACATCTAGGGGACCTCAGGGATGCCAGG
CCTGCAGGCCAGGAGAAAGGAAGTGCAGAGGTGAGGGGTAAAGTCCCTGCTATTGGGAGGGCAGGCCCGG
AGCAGGGCTCCTCTGCTAGAGCAGCAAGTGCTGGGCCCCAGGTGAGCTGCGTTCAGACAGTCCCATCAGA
TGGCCAGGGGGTGAAATCTAGAGATCAGAGGGCTCAGGAGGCAGAAGTTGGGGAGTCAAGGGTTCTAGAA
ACAGAGGCTGAGTGGGTGCCATGGGAGGTTATAGGGACATCAAAGACAGATGCTGGGATACCAGAATCCC
TGGATACAGAGGCTGGCACAGCAGAGTCTGAAATATTGGAGGCCCAGGAGTCAGAAGCAGCAAGGTCAGA
GGGCCTGGAACCCGAGGCTGCTGGGACAGCAGAGTCTGAGGTGCTGAGGACCCAGAATAACGAGATCGTG
GTTCTGGGGATGCCGAGGACAGGGCCTGAGATAAGGGAGCCTGAGGAATTTGGGGAAACAGAAGTTGGGG
GTTTTACAGTTCCAGATACCAAGACAGTGATAGCAGAAACTGAGATATTAGAAACCCAGGGGGTAGTGGA
TGGTGAGGCTGCGGTGCTGAAGACACAGGCTGAGATATTGGAAACCCAGAAGACAGAGGCTGGGGAGGCA
GAAGCGGGAACACTGGAGTCCCAGAAGGTAGCAGCCGAAGGTTTGGGGGCTCCAGAAGTGGGGGCAGAGA
TGGCAGAGGCTGAGAAATTGGGGGTGCAGGAGACAGAGGTGGAGATTTGGAGGATTCCAAGAATAGAAAC
CGAAACAGCAGGAACTGAGACATTGGGGATCCACAAAATAGGGCCCCCACAGATGCAACCTAGACTAGTA
GGGGACCAGGAGACCGATGTTTCAGTGATGGAGACAGCAGAAGATGCTATACTGGGGACCCGGGAGATAT
CAGCAGGTTGTGGAGTACTTTTGATAGAAGCAAAGATACCAGAATCCAAGATTGACAGATCCCTGGAGAC
AGAGGAAGGAGATTTAGGGGTTCTAGAGGTAGATACTGGGATAGCAGAGGCTAAGATCTTAGGGATACCA
GAGAGAGCACCAGGGGTTCAGAAGGCTCTGGGAGCTGGAACTGAGGTAGCCAGGGTCTTGGAAGCAGAGG
CTAGCTCTTCAGAAGTCCCAGAGACAGACGCTGAAGAAGCTGAGACACTGCAGGCCAAGGAGCGATCTGA
GAGTTCTGTGGCGCTGAGAGTAGTGGCCAACCTACCAGAATCTGAGCTCTTAGGGACCCAGAAGAAGGTG
GGAGGCACTGGGATATCACAGAGAGAGGTTAGAGAGGCAGAGACCGAAATCCCAAAGACCCAGGAAATAT
CATCTGAGGGTTCAGGAGTTCCAGACTTGGAGGCTAAGATGGAAGAGTCTGGGAGGAAAATGGAGATTTG
GGAGACCCCAGAGGTAGAGAAAGTGAATTCTGAGTTATTTGGAACCCAGAAAGGCTCAGAGATCCCAGAA
CTAGAAACTAAGACCATAAAGTCTGAGATTCTGGACACCCAGGAGACAGAAGTAGGGGGCTTGGGGCTTC
GTCGAGGAGAGGCTGAGAAAGCAGAAGCTGAGATGTTAGAAACCCAAAAGACGGAAGCAAAGACAGCTCG
GGATGAAGAAATAGAACTAGTGGATCCTGGGGTCTCCAGTCCAGAGGCTGAGGCACTGAGGGTCCAGTGG
GCAGGGACTGTAGTTTTGGAGTCTGGGGAAGTAAAGGCTGACATTTTGGGGGTCCAGAAGCCTGGATCTT
GGGGAGCTCTTAAATATGAGGCCTTAGATGTCCCCGTAACTAAGCAAAGGCTTTCTGGGGCCAAGGAAGT
GGTGCCAGAGGTACCCAGAGCACAAGAGCCAGAAACTAAAGTTTTGGGGATAGTAGAGGCCAAATCTTGG
ACTTTGGGGCAGCAGGAAGCAGAGATGGAGGGGTTTGAGTCTCCAGAGAATAAATCTAATATTTTTGAGG
CCCAGGAAGCAGATTCTGGGGTCTTGGGAACCATGAAGGGGAAAGAAGCTGTTGAAAGCCTCGAGGAGGC
TGGCCTGAGTAAGGCACAAGTGGCCAGTGAGGCAGGGGCTGGGGTGCCCAGGCCCTCAGGGGCCTCTTCC
CTAGAGGAACCTGAAGAGGACAGGAGGCTGCCGGGCAGCCAGGCACCACCTACCCTGGTCAGCTCCAGCC
AGTCCCTGTTGGAGTGGTGCCAAGAGGTCACCAACGGCTACCGTGGTGTCTGCATCACCAACTTCACCAC
GTCCTGGCGCAATGGCCTGGCCTTCTGTGCTATTTTACATCGATTCTACCCAGACAAGATCGATTATTTC
TCCCTTGATCCCCTCAACATCAAACAGAACAACAAGCAGGCTTTTGATGGCTTCGCTGCCCTGGGTGTGT
CTCGGCTGCTCGAGCCGGCGGACATGGTACTTCTGTCCGTACCTGACAAGCTCATCGTCATGACGTACCT
GTGCCAGATCCGTGCCTTCTGCACTGGGCAGGAGCTGCAGCTGGTGCAACTGGAGGGCGGCGGTGGCTCT
GGCACTTATCGTGTGGGCAACGCCCAGCCGAGCCTGCCCGACTGTCTGGACGCAGGAGACCTGGCGCAGC
GATTACGCGAGCATGGGGCTGAAGTGCCCACAGAACCTAAGGAGGCTGTGAACCGCGGGACTGGGGCAAT
ACCAAAGGTGGCCTCCAGGGACACGGACCTGAGCTGCTCCTCTAAGGATGGGGAGGCAGAGGTTGCCCAG
GAAGCAATCCCTCAAGAGGCGCCCACCGACGGCCCTAGAGCCAGGTCGTCCACAACCCCGGTGGTCCCTG
CAGAGGGGCTGGTGAACGGAGTGGGGGCGTCAGGTGGTGTGAGTGGTGTGAGACTGAGACGGTCCTCTGT
CAATGGGGAGGCTGGGCCAGTACCTCCACCCCGAGCACATGGCTCTTTCTCCCACGTGCGGGACGCCGAT
TTGCTAAAGAAGAGGCGATCGAGGTTAAGGAATAGCAACTCTTTCTCTGTGGATGACCAGGACTCTGGAG
CTGCAGTTGGAGCAGGGCCTGCAGGGCCTGGAGCTGTGGAAGGTCCAAACCCTGCCTCCAGCCCTGACGC
TAACCCACTCCCAGCCCCAGCCCCACAGCAGCCGCCCGGTGGGCCCCCTCCTACTGAGGAGTCATCACCC
AGCCTGGGGGAAGAGACAGGCCTGCAACGGTTCCAGGACACAAGTCAGTACGTGTGCGCAGAGCTGCAAG
CCCTGGAGCAGGAACAGGGACAGATAGATGGGAGGGCCGCTGAGGTGGAGAAGCAGCTGAGGAGCCTCAT
GGAATCAGGTGCCAACAGGCTGCAGGAGGAGGTGCTGATTCAGGAATGGTTCACCCTGGTCAACAAGAAG
AATGCGCTCATCCGGAGGCAGGACCAGCTGCAGCTGCTCATCGAGGAGCAGGACTTGGAGCGGAGGTTTG
AACTGCTGAGCCGAGAGTTGCGGGCCATGCTGGCCATTGAAGAGTGGCAGAAAACAGTTGCGCAGCAGCA
CCGCGAGCAACTCCTGTTGGAGGAGCTGGTGTCTCTGGTGAACCAGAGGGATGAACTGGTCCGGGACCTG
GACCAGAAGGAACGGATCGCTCTGGAGGAAGATGAGCGCCTAGAACGAGGCCTGGAGCAGAGACGTCGCA
AGGTGAGCCGGCAGCTGAGCAGGCGGGAACGCTGTACCCTGAGCTGA

Translation (1718 aa):
MTSVWKRLQRVGKRAAKFQFVACYHELVLECTKKWQPDKLVVVWTRRNRRICSKAHSWQPGIQNPYRGTV
VWMVPENVDISVTLYRDPHVDQYETKEWTFIIENESKGQRKVLATVDVNLAHHAGPVPAQVPLRLRLKPK
SVKVVHAELSLTLSGVLLREGRATDDDMQSLASLMSVKPSDVGNLDDFAESDEEEANGPGAPEVRTRGPQ
SDLSRELKTLCEEEDEGHIRPQQAAARPSSAEDTSPAPVSAPAPPVRAFRGQGSEPAAITGGQVGPETPE
PPPSPPETRSTGQPGQTMVPTPAPRLRKGSDAPSSPVPCSGDEVPNTSEDPPTGMGSSGETQAQISSQEG
TEAHEARPEPDIEVRGSKDSLGGERSKVEEEDTGDRPGASGAGNREKNTKKSDTTAGEAGESSELHQVDA
EHKSKVQHRATEGPEAAGPTPKARLGDTPEAPPRSAQRRMGVRTQEEAPSDLNPPPAEPEEHLGDLRDAR
PAGQEKGSAEVRGKVPAIGRAGPEQGSSARAASAGPQVSCVQTVPSDGQGVKSRDQRAQEAEVGESRVLE
TEAEWVPWEVIGTSKTDAGIPESLDTEAGTAESEILEAQESEAARSEGLEPEAAGTAESEVLRTQNNEIV
VLGMPRTGPEIREPEEFGETEVGGFTVPDTKTVIAETEILETQGVVDGEAAVLKTQAEILETQKTEAGEA
EAGTLESQKVAAEGLGAPEVGAEMAEAEKLGVQETEVEIWRIPRIETETAGTETLGIHKIGPPQMQPRLV
GDQETDVSVMETAEDAILGTREISAGCGVLLIEAKIPESKIDRSLETEEGDLGVLEVDTGIAEAKILGIP
ERAPGVQKALGAGTEVARVLEAEASSSEVPETDAEEAETLQAKERSESSVALRVVANLPESELLGTQKKV
GGTGISQREVREAETEIPKTQEISSEGSGVPDLEAKMEESGRKMEIWETPEVEKVNSELFGTQKGSEIPE
LETKTIKSEILDTQETEVGGLGLRRGEAEKAEAEMLETQKTEAKTARDEEIELVDPGVSSPEAEALRVQW
AGTVVLESGEVKADILGVQKPGSWGALKYEALDVPVTKQRLSGAKEVVPEVPRAQEPETKVLGIVEAKSW
TLGQQEAEMEGFESPENKSNIFEAQEADSGVLGTMKGKEAVESLEEAGLSKAQVASEAGAGVPRPSGASS
LEEPEEDRRLPGSQAPPTLVSSSQSLLEWCQEVTNGYRGVCITNFTTSWRNGLAFCAILHRFYPDKIDYF
SLDPLNIKQNNKQAFDGFAALGVSRLLEPADMVLLSVPDKLIVMTYLCQIRAFCTGQELQLVQLEGGGGS
GTYRVGNAQPSLPDCLDAGDLAQRLREHGAEVPTEPKEAVNRGTGAIPKVASRDTDLSCSSKDGEAEVAQ
EAIPQEAPTDGPRARSSTTPVVPAEGLVNGVGASGGVSGVRLRRSSVNGEAGPVPPPRAHGSFSHVRDAD
LLKKRRSRLRNSNSFSVDDQDSGAAVGAGPAGPGAVEGPNPASSPDANPLPAPAPQQPPGGPPPTEESSP
SLGEETGLQRFQDTSQYVCAELQALEQEQGQIDGRAAEVEKQLRSLMESGANRLQEEVLIQEWFTLVNKK
NALIRRQDQLQLLIEEQDLERRFELLSRELRAMLAIEEWQKTVAQQHREQLLLEELVSLVNQRDELVRDL
DQKERIALEEDERLERGLEQRRRKVSRQLSRRERCTLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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