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Report for CCDS49706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49706.1 Public Mus musculus 15 Kif21a 23 108 98 CCDS HistoryNCBI Gene:16564Re-query CCDS DB by CCDS ID:49706.1Re-query CCDS DB by GeneID:16564See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49706.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109287.3 ENSMUSP00000104910.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109287.3Link to Ensembl Protein Viewer:ENSMUSP00000104910.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109287Re-query CCDS DB by Protein ID:ENSMUSP00000104910
Original member Current member NCBI NM_001109042.2 NP_001102512.1 Accepted alive Link to Nucleotide Sequence:NM_001109042.2Link to Protein Sequence:NP_001102512.1Re-query CCDS DB by Nucleotide ID:NM_001109042Re-query CCDS DB by Protein ID:NP_001102512Link to BLAST:NP_001102512.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001102512.1 1567 Q9QXL2-3 1567 100% 0 0

Chromosomal Locations for CCDS 49706.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 90934450 90934543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90935635 90935834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90937161 90937331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90938985 90939102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90940431 90940595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90942114 90942294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90943765 90943901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90956295 90956509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90959077 90959131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90959688 90959748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90964975 90964995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90965467 90965632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90966337 90966438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90967196 90967390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90968061 90968214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90968357 90968571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90968763 90968831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90969778 90969885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90970679 90970878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90971083 90971271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90971665 90971788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90972625 90972715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90980795 90980998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90984734 90984797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90985242 90985431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90985785 90985980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90991710 90991825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90993701 90993868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90994341 90994475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90995484 90995633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90997543 90997725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90997833 90998055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 91049659 91049702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4704 nt):
ATGTTGGGCGCTGCGGACGAGAGCTCGGTGCGCGTGGCTGTCAGAATAAGACCACAGCTTGCCAAAGAGA
AGATCGAAGGTTGCCATATCTGCACGTCAGTCACACCGGGAGAGCCTCAGGTCTTCCTCGGGAAGGATAA
GGCCTTTACTTTTGATTATGTGTTTGACATTGACTCCCAGCAGGAGCAGATCTACACCCAGTGCATCGAA
AAGCTCATTGAAGGCTGTTTTGAAGGCTACAATGCCACCGTGTTTGCCTATGGACAAACCGGAGCTGGGA
AAACCTACACGATGGGAACCGGATTTGACGTGAACATCATGGAGGAAGAGCAGGGCATCATCTCTCGTGC
TGTTAGACACCTGTTCAAGAGTATTGATGAGAAAAAGACCTCAGCGATTAAAAACGGGCTGCCCCCTCCT
GAATTCAAAGTGAATGCCCAGTTCCTAGAGCTCTATAATGAAGAGGTCCTTGACTTGTTTGATACCACTC
GGGATATTGATGCAAAAAATAAAAAATCAAATATAAGAATTCATGAAGATTCAACTGGAGGAATTTATAC
TGTGGGCGTCACAACACGCACTGTGAATACAGAACCGGAGATGATGCAGTGTCTGAAGCTGGGCGCTCTC
TCGCGCACCACGGCCAGCACCCAGATGAACGTACAGAGCTCTCGTTCACACGCCATCTTTACCATTCACG
TGTGTCAAACCAGAGTGTGTCCCCAAACAGATGCTGAGAACGCAACTGATAATAAGCTGATCTCCGAATC
GTCGCCAATGAATGAGTTTGAGACGCTGACGGCGAAGTTTCACTTTGTTGATCTGGCGGGATCGGAAAGA
CTGAAGAGAACCGGAGCTACAGGCGAGAGAGCAAAAGAGGGCATTTCCATCAACTGCGGGCTTTTGGCTC
TTGGGAATGTAATCAGCGCCTTGGGGGACAAGAGCAAGAGAGCCACCCATGTCCCTTACAGAGACTCTAA
GCTGACAAGACTCTTGCAGGATTCCCTTGGGGGTAACAGCCAAACCATCATGATAGCATGCGTCAGCCCT
TCAGACAGGGATTTCATGGAGACGTTAAACACTCTGAAGTACGCCAATCGAGCGAGAAATATCAAGAACA
AGGTGATGGTCAATCAAGACAGAGCCAGTCAGCAAATCAACGCGCTGCGGAGCGAGATCACGCGCCTTCA
GATGGAGCTCATGGAATACAAAACCGGTAAAAGAATAATTGACGAGGAAGGCGTGGAAAGCATCAATGAC
ATGTTTCATGAGAATGCTATGCTGCAGACGGAAAATAATAATCTGCGTGTAAGAATAAAAGCCATGCAGG
AGACCGTTGATGCACTGAGGGCCAGAATCACGCAGCTTGTCAGTGAGCAGGCCAACCAAGTTCTTGCCCG
AGCAGGTGAAGGGAACGAAGAGATCAGTAATATGATTCATAGTTATATCAAAGAAATTGAAGACCTCAGG
GCAAAATTATTAGAAAGTGAAGCAGTGAACGAGAACCTTCGGAAGAACTTGACCAGAGCCACGGCGAGAT
CTCCTTACTTCAGTGCCTCCTCAGCTTTCTCGCCTACTATACTGTCTTCAGACAAGGAGACTATCGAAAT
TATAGATCTAGCAAAGAAAGACTTGGAGAAGCTAAAACGGAAAGAGAAGAAGAAGAAGAAAAGTGTTGCC
GGGAAAGACGATAATGCAGACACTGACCAGGAGAAGAAAGAAGAAAAGGGTGTTTCAGAGAAAGAAAACA
ATGAGCTAGACGTGGAAGAGAATCAAGAAGTGAGTGACCACGAGGATGAGGAAGAGGAGGAAGAGGACGA
GGAGGAAGAGGATGACATTGAAGGAGAAGAAAGCTCTGATGAATCAGATTCCGAATCTGATGAAAAAGCT
AACTATCAAGCCGACTTAGCAAATATCACCTGCGAGATTGCGATTAAGCAGAAGCTGATCGACGAACTGG
AGAACAGCCAGAAACGGCTGCAGACCCTGAAAAAGCAGTACGAGGAGAAGCTGATGATGCTCCAACATAA
GATCCGGGACACGCAGCTGGAGAGGGACCAGGTGCTCCAGAACCTAGGCTCGGTGGAGTCATACTCGGAA
GAAAAGGCCAAGAAAGTGAAGTGCGAATATGAGAAGAAGCTCCACGCCATGAACAAAGAGCTGCAGCGAC
TGCAGACGGCCCAAAAGGAGCACGCCAGGCTCCTCAAAAACCAGTCTCAGTATGAAAAGCAGCTCAAGAA
ACTGCAGCAAGACGTCATGGAAATGAAGAAAACCAAGGTTCGTCTAATGAAGCAGATGAAAGAAGAGCAG
GAGAAAGCCCGGCTGACAGAATCTCGAAGGAACCGGGAAATCGCTCAGCTGAAGAAGGATCAGCGCAAGC
GAGATCATCAACTTAGACTTCTAGAGGCCCAGAAAAGAAATCAAGAAGTAGTTCTGCGACGCAAAACGGA
AGAGGTTACAGCTCTCCGCAGGCAAGTGAGGCCCATGTCTGATAAAGTAGCGGGAAAAGTTACTCGGAAG
CTGAGCTCATCCGAAAGCCCCGCTCCGGACACAGGTTCCAGTGCGGCTTCCGGGGAAGCAGACACATCAC
GGCCAGGCACCCAGCAGAAAATGAGGATCCCCGTGGCAAGAGTCCAGGCATTACCAACACCTACAACAAA
TGGCACCAGGAAAAAATATCAGAGGAAAGGATTCACTGGCCGGGTGTTCACTTCCAAGACAGCCCGCATG
AAGTGGCAGCTACTGGAGCGCCGGGTGACCGACATCATCATGCAGAAAATGACCATCTCCAACATGGAGG
CGGACATGAACAGACTCCTCAGGCAACGGGAAGAACTCACAAAAAGGCGAGAGAAACTTTCTAAAAGGAG
AGAGAAGATAGTCAAGGAGAGCGGAGAGGGAGATAAAAGTGTGGCTAACATCATCGAGGAGATGGAGTCC
CTGACAGCCAACATAGATTACATCAATGATAGCATTGCCGACTGTCAAGCCAACATCATGCAGATGGAGG
AGGCAAAGGAAGAAGGGGAGACATTGGATGTCACCGCTGTCATTAATGCCTGTACACTGACAGAAGCTCG
GTACCTGCTAGATCACTTCCTGTCAATGGGCATCAATAAGGGTCTGCAGGCTGCCCAGAAAGAGGCTCAA
ATTAAAGTCCTCGAGGGTCGACTCAAACAGACCGAAATCACCAGTGCAACCCAGAACCAACTCTTATTCC
ATATGCTGAAGGAGAAGGCAGAGCTAAACCCAGAGCTGGATGCCTTGCTAGGCCACGCACTGCAAGATCT
AGATGGCGCCCCACCAGAAAACGAGGAGGACAGCAGCGAGGAAGATGGCCCTTTACACAGCCCGGGGTCG
GAGGGAAGCACGTTATCTTCAGACCTTATGAAGCTTTGTGGTGAAGTGAAACCAAAGAACAAGGCTCGAA
GGAGAACCACCACTCAGATGGAGTTGCTGTATGCAGATAGCAGTGAAGTAGCCTCAGACACTAGTGCAGG
AGATGCCTCCTTGTCTGGCCCTCTGGCACCTGTTGCAGAAGGGCAGGAGATTGGAATGAACACAGAGACA
AGTGGTACTTCTGCTAGGGACAAAGAGCTTCTTGCCCCATCTGGCTTACCTTCTAAGATAGGCAGCATAG
GCATAATCAACCCATTTCCTGCCTGCAAAGGAGTCAGAGCCTCTCCTCTTCAGTGCGTTCACATAGCTGA
AGGGCACACCAAGGCTGTGCTCTGTGTGGATTCTACGGATGATCTTCTCTTCACCGGATCAAAAGATCGC
ACTTGTAAAGTATGGAATCTCGTGACTGGACAGGAAATTATGTCCCTGGGGGTTCACCCTAACAACGTGG
TGTCTGTAAAATACTGTAATTATACCAGTCTGGTCTTCACCGTGTCGACATCTTATATTAAGGTGTGGGA
TATCAGAGAGTCAGCAAAATGCATTCGAACATTAACATCTTCAGGTCAAGTTACCCTTGGAGAAGCGTGT
TCTGCCAGCACCAGCCGGACAGTAGCTATTCCTTCCGGGGAGAGCCAGATCAATCAAATTGCACTAAACC
CAACTGGCACTTTCCTCTACGCGGCCTCTGGAAATGCCGTCAGAATGTGGGACCTTAAAAGGTTTCAGTC
TACAGGAAAGCTAACCGGACACCTGGGTCCTGTTATGTGCCTTACGGTAGACCAGATCTCCAATGGACAG
GACCTCATCATCACTGGCTCAAAAGACCACTACATCAAAATGTTCGATGTGACTGAAGGGGCTCTTGGAA
CTGTAAGTCCCACCCACAACTTCGAGCCTCCTCATTATGATGGGATAGAAGCACTGGCCATTCAAGGCGA
TAACCTATTCAGTGGGTCCAGAGATAATGGAATCAAGAAATGGGACTTAGCTCAGAAAGGTCTTCTTCAG
CAAGTCCCAAATGCACACAAAGACTGGGTGTGTGCCCTGGGCCTGGTGCCAGGCCATCCGGTTTTGCTGA
GTGGCTGCAGAGGCGGCATTCTGAAACTCTGGAATGTGGACACTTTTGTGCCCGTTGGAGAGATGAGAGG
TCATGACAGTCCCATCAATGCCATTTGTGTTAACTCCACCCATGTCTTTACTGCTGCTGATGATCGAACC
GTGAGAATCTGGAAGGCCCACAACTTGCAAGATGGTCAACTCTCTGACACCGGCGATCTGGGGGAGGATA
TTGCCAGTAATTAA

Translation (1567 aa):
MLGAADESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCIE
KLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIMEEEQGIISRAVRHLFKSIDEKKTSAIKNGLPPP
EFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSTGGIYTVGVTTRTVNTEPEMMQCLKLGAL
SRTTASTQMNVQSSRSHAIFTIHVCQTRVCPQTDAENATDNKLISESSPMNEFETLTAKFHFVDLAGSER
LKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSP
SDRDFMETLNTLKYANRARNIKNKVMVNQDRASQQINALRSEITRLQMELMEYKTGKRIIDEEGVESIND
MFHENAMLQTENNNLRVRIKAMQETVDALRARITQLVSEQANQVLARAGEGNEEISNMIHSYIKEIEDLR
AKLLESEAVNENLRKNLTRATARSPYFSASSAFSPTILSSDKETIEIIDLAKKDLEKLKRKEKKKKKSVA
GKDDNADTDQEKKEEKGVSEKENNELDVEENQEVSDHEDEEEEEEDEEEEDDIEGEESSDESDSESDEKA
NYQADLANITCEIAIKQKLIDELENSQKRLQTLKKQYEEKLMMLQHKIRDTQLERDQVLQNLGSVESYSE
EKAKKVKCEYEKKLHAMNKELQRLQTAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVRLMKQMKEEQ
EKARLTESRRNREIAQLKKDQRKRDHQLRLLEAQKRNQEVVLRRKTEEVTALRRQVRPMSDKVAGKVTRK
LSSSESPAPDTGSSAASGEADTSRPGTQQKMRIPVARVQALPTPTTNGTRKKYQRKGFTGRVFTSKTARM
KWQLLERRVTDIIMQKMTISNMEADMNRLLRQREELTKRREKLSKRREKIVKESGEGDKSVANIIEEMES
LTANIDYINDSIADCQANIMQMEEAKEEGETLDVTAVINACTLTEARYLLDHFLSMGINKGLQAAQKEAQ
IKVLEGRLKQTEITSATQNQLLFHMLKEKAELNPELDALLGHALQDLDGAPPENEEDSSEEDGPLHSPGS
EGSTLSSDLMKLCGEVKPKNKARRRTTTQMELLYADSSEVASDTSAGDASLSGPLAPVAEGQEIGMNTET
SGTSARDKELLAPSGLPSKIGSIGIINPFPACKGVRASPLQCVHIAEGHTKAVLCVDSTDDLLFTGSKDR
TCKVWNLVTGQEIMSLGVHPNNVVSVKYCNYTSLVFTVSTSYIKVWDIRESAKCIRTLTSSGQVTLGEAC
SASTSRTVAIPSGESQINQIALNPTGTFLYAASGNAVRMWDLKRFQSTGKLTGHLGPVMCLTVDQISNGQ
DLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPPHYDGIEALAIQGDNLFSGSRDNGIKKWDLAQKGLLQ
QVPNAHKDWVCALGLVPGHPVLLSGCRGGILKLWNVDTFVPVGEMRGHDSPINAICVNSTHVFTAADDRT
VRIWKAHNLQDGQLSDTGDLGEDIASN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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