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Report for CCDS49697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49697.1 Public Mus musculus 15 Tubgcp6 23 108 98 CCDS HistoryNCBI Gene:328580Re-query CCDS DB by CCDS ID:49697.1Re-query CCDS DB by GeneID:328580See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49697.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109353.8 ENSMUSP00000104977.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109353.8Link to Ensembl Protein Viewer:ENSMUSP00000104977.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109353Re-query CCDS DB by Protein ID:ENSMUSP00000104977
Original member Current member NCBI NM_001163319.1 NP_001156791.1 Accepted alive Link to Nucleotide Sequence:NM_001163319.1Link to Protein Sequence:NP_001156791.1Re-query CCDS DB by Nucleotide ID:NM_001163319Re-query CCDS DB by Protein ID:NP_001156791Link to BLAST:NP_001156791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156791.1 1769 G5E8P0-1 1769 100% 0 0

Chromosomal Locations for CCDS 49697.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89100412 89100503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89100585 89100784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89100866 89101079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89101153 89101285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89101362 89101556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89101775 89101916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89102001 89102169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89102254 89102407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89102545 89102603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89102817 89104290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89104419 89104490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89104734 89104872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89106072 89106187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89106269 89106357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89106443 89106524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89107413 89107562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89107951 89108090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89108561 89108652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89108947 89109056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89109221 89109296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89110046 89110167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89111116 89111289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89116045 89116255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89120510 89120673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89122077 89122817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5310 nt):
ATGGCCAGCATCACCCAGCTGTTCGATGACCTCTGCGAGGCTCTCTTACCTGCTGCCCAAGCTCGCCCCG
GCCAGCGCAGTGTGAACAGGAAGAGGGCGAAGCGGAGCCTTAAGAGGGTGGCCTACAATGCCCTTTTCGC
AAATCTTTTTCAAGAGGACACCCATCAACGGCAGCCCGACTCGTCGAAGCTCCCCGTGAAAAACAAGGTC
CTCATGCTGTCCTTCGATTTGAGGGTGGGGGGCTTGGGGCCAGAGGCTGACCGTTTGGAGGAGCTCGTGG
AGAAACTTGAAGCAGCCCCTGACTGTCCTTTTGTGGAGGTAGCATCAGTGTTGGACCTCTTAGTTCAGCT
GGCAGGAAGTGGCCCCCCTCAAGTGCTGCGTAGAAAACGGGATTACTTCTTTAACAACAAGCATGCAGGC
CGAAACATACCCTACAGCGGCTACGATTGCTATGACTTGAGTGTGTTTGAAATGGACGTTCGGTCATTTA
TCTCTGGGGAGGAGAATTTGTGTCATCACACGGTCCAGGAAGCGCTTCAGGTGATGGAGGCTGCCCCAGG
CACTGGCCTGCCCACCGTTGGGCTCTTCTCAATTGGTGACTCTTGTGGTGACAGGTTTGAGAGAGACACC
AGGGTCTCCCTCTTTGGTGCACTTGTGCATAGCCGCACCTATGACATGGATGTGCGACTGGACCTACCAC
CTGTGCCAGACAGCGCGGACTTCTCTGGACTAGCCATCAAGGTCCCACAGATTGTGGATCAGTGGGAAGA
TGAAGGTTTCCAGTCAGCTTCCAATTTAACTCCCGACTCCCAGTCTGAACCAAGCATGACCCCCGATTTG
GACCTGTGGGAAGCTGTGCTCACATACGAAGCCAGCAAGCGGAGGTGCTGGGAGCGTATTGGATGCCCCC
CTGGTCACCGAGAGGAGCCCTACCTCACTGAGGCAGGACGGGATGCCTTTGACAGGTTCTGCAGGCTCCG
TCATGGAGAGCTACAGGCCCTCAGTGGGGGCCTTCTACAGGCCCCGAAGCCTGTGCTGGTGGAGGAAAGC
GAGCTGGTGAAAGACTCACTGAACGTTCTGCTGGGCGTTGTTTCTGCTACATTTTCCCTGTGTCGGCCGA
CTCAAGCCTTTGTAGTGGAGCCGGGTGTGCATGTGTCAGGTGCATCTCCTGAAAGCATCAGCAGCATCCT
CTCAGAGGTGGCGGAGTATGGAACCTGTTACACACGGCTGAGCCATTTCTCTCTGCAACCTGTTGTAGGC
TCCTTGTGCAGCAGGGGCCTTGTTTTCCAGGCCTTCACCAGCGGCCTAAGGAGGTACTTGCAGTATTACC
GTGCCTGTGTGCTCTCCACTCCACCCACCCTCAGTCTCCTCACCATTGGCTTTCTCTTCAAGAAGCTGGG
CCGGCAGCTCAGGTACTTGGCTGAGCTTTGTGGTGTTGGCACTGTATCCCTGGCGACCAGTGGAGAACCC
AGGGCTGTGTTCCCCACTGGGGTGAAGCTTCTGTCCTACCTCTACCAGGAAGCACTGGATAACTGCAGTA
ATGAGCACTATCCCGTTTTGCTGTCCCTCCTGAAGACCAGCTGTGAGCCCTACACACGGTTCATCCACGA
TTGGGTGTACAGTGGAGTCTTCAGAGATGTTTATGGGGAGTTCATGATCCAGGTTAACCATGAGTACCTC
AGCTTCAGAGACAAGTTTTACTGGACCCATGGCTACGTGCTCATTTCCAAAGAGGTGGAGGACTGTGTTC
CTGTATTCTTGAAACACATTGCTCATGATGTGTATGTCTGTGGGAAGACCATCAACCTACTGAAGCTCTG
CTGTCCCCGGCATTACCTTTGTTGGTCTGATGTCCCTGTCCCTCGGATCTCGGTGATTTTCTCTCTTGAG
GAACTGAAGGAGATTGAGAAGGACTGTGCTGTCTATGTTGGGCGGATGGAGAGAGTCGCACGTCATAGCT
GTATCAGCAAGGAGGAAAAGGAATTACGTATGGAAATTGCGAAACAAGAACTAATTGTCCATGCCCGGGA
AGCCGCGTCCAGGGTCCTGAGCGAGTTGAGTGACCGGCAGATGGCAGAACAGATTGCTCAGGACACTCGG
AAGCGAGAGCAGTTTCAGCGACTGAAGGAACAGTTTGTGAAGGATCAGGAGCGACGCCTGGCAGCCAGAC
AAGAAGAGCTAGATGATGACTTCAGCTATGCCCGTGAGCTCCGTGACCGGGAGAAGAGGCTAAAGGCCTT
GGAGGAAGAGCTGGAGAGGAAGGCCAGGCAGGCGCTGGTTGACCATTATAGCAAGTTGTCTGCAGAGGCA
GCTCGTCGAGAGCAGAAGGCTCTGTGGAGAATCCAGAGGCATAGGCTGGAAAGCGCACGACTTCGTTTTC
TCCTAGAAGACCAGAAGTGCATTCAGGAGATGCTGAGAGACATGGAGGCTCAGCAGCCCCAGGAGCCGCC
GAGTGTGTTCCCATCCACAGGCTCTCAGGTCACATCTACAGGTCCTGAGCACGCAGGGGAAGGCCATAGC
TGTGATCCGGGGTTCACAGAGCTGCATTGGGGTTGTCCAAGCCTACCGTGTGCATCGACACCATCAGTCC
CCAAGTCTGCCACAGAGGGAGCTGATGACTCGGGAGCTGGGCCATTCTCGACTGGTCTTAGCATCACAGA
CTTTCTGCCCGTGGACTCTGGAGAGGAACAGCCTGTGGAGAACACTGGCGTTCCCTTTTTAGAGGTGGCT
CTGCAGACCATCTGCTCAGACCTATCCCCTGTAGCCCCTGAGCCAGCGGCACTCACAGCAGGGGGCCCCC
AGGCTACCCAGTCAGAGTATGATTTCAATACCATACTGAGGCCAGCTATGGCTACCTCCCTCTCACCAGG
ACCCTTCCAGGATGTTCAGAATAGCGTGGACAGTGACAAACAGCATCTACTGGGGGATATGTCCACAAAA
GTAGATTCTTATATCCATGATATGCAAGAGACTTTGCCTTGCCCACATCCACTCAGTCATGCCACTCCTG
TGGAGGGGAGCCTCCAGCCTGTAGGCCAGCTCCTTGAACACATGTCAGAGACTACTGTCTCTACAGAGAG
CCATGCTTCTGGGATGGCTCCTTGTCAGCAACTTAGCATTTCCAGACACGTGTCAGATGCTAACATCAAG
GTGGGGGATTATATGTCAGATGTGGCTCTTCCTCGGCCACGGTGGAATGTCCATGGCCATGTGTCAGAGG
CCAGCATTGGAGTTGGGGAGAATATGGCCGAAGTGGCTCCTTCTAGGCCACGGTGGAATGTCCACGGACA
TGTGTCAGATGCCAGCATCAAGATAGGGGAGAATATGTCAGATGTGGCTCCTTCTCGGACACGGTGGAAC
ATTCATGGGCATGTGTCAGATGCCAGCATCAAGGTAGGGGAGAATGTATCAGATGTGACTCCTTCTCGGC
CGCGGTGGAATGTCCACGGGCATGTGTCAGAGGCCAGCATCAAGGTAGGGGAGAATGTATCAGATGTGAC
TCCTTCTCGGCCGCGGTGGAATGTCCACGGGCATGTGTCAGAGGCCAGCATCAAGGTAGGGGAGAATGTA
TCAGACGTGACTCCTTCTCGGCCGCGGTGGAATGTCCACGGGCATGTGTCAGATGCCAGTATTAGGATTG
GGGAAAATGTATCAGATACGGATCTTGATCTTCAGCAACGTGGATGTGCCCAGCCTCCCTTGATTCTGGA
GGAGCCCTTGCCAGAAGCTGAGGCTGACCTCAAGCCCCATCAGTGTCCCCCTGCTCACGTGTCTGAGGCA
GTGCTTGGTGTGGAAGCACAGAGCCCTGCTCTAGAATGTGGGCCACAGCTACCTGAAAAAACGAAGCCTA
CCGTGTGTTCTGGCTTTGGCAGAACAGAGGAAGGTAGCCTACAGACCAAGACCCTTGTGGCTGAGCCTAG
CATGCTGGGAAGTGGCATCCCTGAAGAGAAAGGCCCAGGGAAGAGTAGGGATGCTGAAGACCTTTCTCCA
TGTTTGCCTTCAAGCTCACAGGAAGACACAGCTGTCCCCAGCAGCCCAGGCCCTAGTGATGAGGTATCAA
ACACAGAAGCTGAGGCCAGACGCTGGGGCAAGGAGCAAGCCTATTTGACAGACCTCACAAAATTGTACCA
CCTGGAGCAGTACCCGGACAGCTATGATTCCATGTCAGAGCCTCCTGTTGCTCACCTGGTCCACCACATG
CTTCCCCGGGCCTTTGCTTTCCCTGTTGACCCCCAAGTTCAGTCAGCAGTAGACGAGAGTGCAGTGCAGC
TGAGCGAGCTGCTGACATTGCCTGTGCTTATGAAGCGTTCCCTTATGGCGCCTCTGGCTGCCCATGTCAG
CCTGGTCAGCAAAGCCGCAGTTGACTACTTCTTTGTGGAGCTGCACCTGGAGACACACTTTGAGGCACTG
CGCCATTTCCTGCTGATGGAAGATGGAGAGTTCGCTCAGTCCCTTAGTGACCTGCTCTTTGAGAAGCTAG
GGGCTGGGCAGACGCCTGGAGAGCTGCTCAACCCACTGGTCCTTAACAGCATCCTGAGCAAGGCCCTGCA
GTACAGCCTCCACGGGGACACCCCGCATGCTTCCAACCTGTCTTTTGCTCTCAAGTACCTGCCTGAGGTG
TTTGCCCCGAATGCCCCAGATGTGCTGAGCTGCCTGGAGCTCAGGTACAAGGTCGACTGGCCCCTCAACA
TTGTTATCACCGAGAGCTGCCTGAACAAGTACAGTGGCATCTTCTCCTTCCTGCTGCAGCTGAAGCTCAT
GATGTGGACACTCAAAGACATCTGCTTCCACCTCAAGCGCACAGCCCTCGTGAGCCACACGGCTGGCTCA
GTGCAGTTCCGACAGCTGCAGCTGTTCAAGCATGAGATGCAGCACTTTGTGAAGGTCATCCAGGGCTACA
TTGCTAACCAGATCCTGCATGTCAGCTGGTGTGAGTTCCGAGCCCGTCTAGCTGTGGTGGGTGACCTGGA
GGAGATTCAGCGGGCCCATGCCGAGTACCTGCACAGGGCTGTTTTCAGGGGCCTACTGACAGAGAAGGCA
GCGCCAGTCATGAACATCATCCATAGCATCTTCAGCCTGGTGCTCAAGTTCCGAAGCCAGCTCATCTCTC
AGAACTGGGGCCCGGCCACCGGCCCCCGTGGTGCCGAGCACCCCAACTTCCCCCTCATGCAGCAGTCCTA
CAGCACCTTCAAGTACTACTCCCACTTCCTCTTCAAAGTAGTGACCAAGCTGGTGAACCGAGGCTATCAG
CCCCACCTGGAAGACTTTCTGCTTCGCATCAACTTCAACAACTACTACCAGGACTCCTGA

Translation (1769 aa):
MASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSLKRVAYNALFANLFQEDTHQRQPDSSKLPVKNKV
LMLSFDLRVGGLGPEADRLEELVEKLEAAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAG
RNIPYSGYDCYDLSVFEMDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDT
RVSLFGALVHSRTYDMDVRLDLPPVPDSADFSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMTPDL
DLWEAVLTYEASKRRCWERIGCPPGHREEPYLTEAGRDAFDRFCRLRHGELQALSGGLLQAPKPVLVEES
ELVKDSLNVLLGVVSATFSLCRPTQAFVVEPGVHVSGASPESISSILSEVAEYGTCYTRLSHFSLQPVVG
SLCSRGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVGTVSLATSGEP
RAVFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWVYSGVFRDVYGEFMIQVNHEYL
SFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGKTINLLKLCCPRHYLCWSDVPVPRISVIFSLE
ELKEIEKDCAVYVGRMERVARHSCISKEEKELRMEIAKQELIVHAREAASRVLSELSDRQMAEQIAQDTR
KREQFQRLKEQFVKDQERRLAARQEELDDDFSYARELRDREKRLKALEEELERKARQALVDHYSKLSAEA
ARREQKALWRIQRHRLESARLRFLLEDQKCIQEMLRDMEAQQPQEPPSVFPSTGSQVTSTGPEHAGEGHS
CDPGFTELHWGCPSLPCASTPSVPKSATEGADDSGAGPFSTGLSITDFLPVDSGEEQPVENTGVPFLEVA
LQTICSDLSPVAPEPAALTAGGPQATQSEYDFNTILRPAMATSLSPGPFQDVQNSVDSDKQHLLGDMSTK
VDSYIHDMQETLPCPHPLSHATPVEGSLQPVGQLLEHMSETTVSTESHASGMAPCQQLSISRHVSDANIK
VGDYMSDVALPRPRWNVHGHVSEASIGVGENMAEVAPSRPRWNVHGHVSDASIKIGENMSDVAPSRTRWN
IHGHVSDASIKVGENVSDVTPSRPRWNVHGHVSEASIKVGENVSDVTPSRPRWNVHGHVSEASIKVGENV
SDVTPSRPRWNVHGHVSDASIRIGENVSDTDLDLQQRGCAQPPLILEEPLPEAEADLKPHQCPPAHVSEA
VLGVEAQSPALECGPQLPEKTKPTVCSGFGRTEEGSLQTKTLVAEPSMLGSGIPEEKGPGKSRDAEDLSP
CLPSSSQEDTAVPSSPGPSDEVSNTEAEARRWGKEQAYLTDLTKLYHLEQYPDSYDSMSEPPVAHLVHHM
LPRAFAFPVDPQVQSAVDESAVQLSELLTLPVLMKRSLMAPLAAHVSLVSKAAVDYFFVELHLETHFEAL
RHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNSILSKALQYSLHGDTPHASNLSFALKYLPEV
FAPNAPDVLSCLELRYKVDWPLNIVITESCLNKYSGIFSFLLQLKLMMWTLKDICFHLKRTALVSHTAGS
VQFRQLQLFKHEMQHFVKVIQGYIANQILHVSWCEFRARLAVVGDLEEIQRAHAEYLHRAVFRGLLTEKA
APVMNIIHSIFSLVLKFRSQLISQNWGPATGPRGAEHPNFPLMQQSYSTFKYYSHFLFKVVTKLVNRGYQ
PHLEDFLLRINFNNYYQDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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