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Report for CCDS49104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49104.1 Public Mus musculus 12 Map3k9 23 108 98 CCDS HistoryNCBI Gene:338372Re-query CCDS DB by CCDS ID:49104.1Re-query CCDS DB by GeneID:338372See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49104.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035987.8 ENSMUSP00000041819.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035987.8Link to Ensembl Protein Viewer:ENSMUSP00000041819.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000035987Re-query CCDS DB by Protein ID:ENSMUSP00000041819
Original member Current member NCBI NM_001174107.1 NP_001167578.1 Accepted alive Link to Nucleotide Sequence:NM_001174107.1Link to Protein Sequence:NP_001167578.1Re-query CCDS DB by Nucleotide ID:NM_001174107Re-query CCDS DB by Protein ID:NP_001167578Link to BLAST:NP_001167578.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001167578.1 1077 Q3U1V8 1077 100% 0 0

Chromosomal Locations for CCDS 49104.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 81722039 81722523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81724064 81724876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81725722 81725834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81729683 81729836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81730537 81730659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81731992 81732232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81734080 81734255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81735070 81735218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81743798 81743978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81772680 81773093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 81780490 81780874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3234 nt):
ATGGAGTCCTCCAGATCGCTTCTCGGCTGCCTGGCGAGTGCCACTGCCGCCCCGCCGGGGGACGATGCCA
CGGGCGCTGGGGCCGAAGAGGAGGAGGACGAGGAGGAGGCGGCGGCCGAGCTGGGATCTCACGCCGCGCT
GCCCTACTGGACGGCTGTGTTCGAGTACGAGGCGGCGGGCGAGGACGAGCTGACCCTGCGGCTGGGCGAT
GTGGTAGAGGTGCTGTCCAAGGACTCGCAGGTGTCCGGCGATGAGGGCTGGTGGACCGGACAGCTGAACC
AGCGGGTGGGCATCTTCCCCAGCAACTACGTGACCCCGCGTAGCGCCTTCTCCAGCCGCTGCCAGCCGGG
CGCCGAGGACCCCAGCTGCTACCCGCCCATTCAGCTGTTAGAGATTGATTTTGCGGAGCTAACCCTGGAG
GAGATCATCGGCATTGGGGGCTTTGGGAAAGTTTATCGTGCTTTCTGGGCGGGCGATGAGGTGGCCGTGA
AGGCAGCTCGTCACGACCCTGATGAGGACATCAGCCAGACCATAGAGAACGTTCGCCAAGAGGCCAAGCT
CTTTGCCATGCTGAAGCACCCGAACATCATTGCGCTCAGAGGGGTGTGCCTGAAGGAACCCAACCTCTGC
TTGGTCATGGAGTTTGCTCGTGGAGGGCCTCTGAACAGAGTATTGTCTGGGAAGAGGATTCCCCCGGACA
TCCTGGTGAACTGGGCCGTGCAGATCGCCAGAGGGATGAACTATCTACATGATGAGGCGATCGTACCCAT
CATCCACCGAGACCTTAAGTCCAGCAACATATTGATCCTGCAGAAAGTGGAGAATGGAGACCTGAGTAAC
AAGATTCTGAAGATCACCGACTTTGGGCTGGCGCGGGAATGGCACCGGACCACCAAGATGAGTGCGGCGG
GAACATACGCTTGGATGGCACCTGAAGTCATCCGTGCTTCCATGTTTTCCAAAGGCAGCGATGTGTGGAG
CTACGGTGTACTGCTTTGGGAGCTGTTGACTGGCGAGGTGCCCTTCCGGGGCATTGATGGCTTAGCAGTG
GCTTACGGTGTGGCCATGAACAAACTCGCCCTTCCTATCCCCTCTACATGTCCAGAGCCTTTTGCCAAAC
TCATGGAAGACTGCTGGAATCCCGACCCCCACTCGCGCCCATCTTTCACGAGTATCCTGGACCAGCTAAC
GACTATAGAGGAGTCCGGTTTCTTTGAGATGCCCAAGGACTCCTTCCACTGCCTGCAGGACGACTGGAAA
CATGAGATTCAGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGGAGCTCCGAACCTGGGAAGAGGAGC
TGACCCGGGCTGCGCTCCAGCAGAAGAACCAGGAGGAGCTGCTCCGGCGTAGGGAGCAGGAGCTGGCGGA
GCGGGAGATCGACATCCTGGAGCGAGAGCTCAATATCATCATCCACCAGCTGTGCCAGGAAAAGCCCCGG
GTGAAGAAACGCAAGGGCAAGTTCAGGAAGAGCCGGCTGAAGCTCAAGGACGGCAACCGCATCAGCCTCC
CCTCCGATTTCCAGCACAAGTTCACGGTGCAGGCCTCCCCGACCATGGATAAAAGGAAGAGTCTGATCAG
CAACCGGTCGAGTCCTCCTGCAAGCCCCACCATCATCCCTCGCCTTCGAGCCATCCAGTTGACACCTGGT
GAAAGCAGTAAAACCTGGGGCCGGAGCTCAGTTGTTCCAAAAGAGGAAGGGGAGGAGGAGGAGAAGAGGG
CCCCAAAGAAGAAGGGCCGGACATGGGGACCAGGAACACTTGGGCAGAAAGAGCTCACATCAGGAGATGA
AGGCCTCAAGTCCCTGGTAGATGGATACAAGCAGTGGTCATCCAGTGCCCCCAACCTGGGGAAGGGCCCA
AGGAGTAGCCCCGCCCTACCTGGGTTCACCAGCCTTATGGAGATAGAGGATGAGGATAGCGAAGGCCCAG
GAAGCGGAGAGAATCATCAACAGCATTCACCCAACCAGTCCTACCTCTGTATCCCGTTTCCTCGTGGAGA
GGATGGGGATGGCCCCTCTAGTGATGGAGTTCATGAGGAACCTACCCCAGTCAACTCAGCTACCAGTACC
CCTCAGCTGACGCCAACCAACAGCCTCAAGCGCGGTGGGACCCACCACCGGCGCTGTGAGGTGGCTCTGC
TCGGATGTGGAGCTGTTCTGGCAGCCACAGGCCTAGGGTTTGACTTGCTGGAAGCTGGCAAGTGCCAGCT
GCTTCCCCCAGAGGAACCTGAGCCACCAGCCCGGGAGGAGAAGAAGAGGCGTGAAGGTCTTTTCCAAAGG
GCCAGCCGCCCTCGTCGGAGTACCAGCCCCCCCTCCCGAAAGCTCTTCAAGAAGGAAGAGCCAATGACGT
TGCTAGGAGACCCCTCTGCCTCCTTGACACTGCTGTCTCTCTCCTCCATCTCTGAATGCAACTCTACCCG
CTCCCTACTGCGCTCTGACAGTGATGAGATCGTGGTGTATGAAATGCCAGTCAGCCCAGTTGAAGCTCCA
CCCCTAACCCAATGTACCCACAACCCCCTGGTTAATGTCCGAGTGGAGCGCTTCAAGAGAGACCCCAACC
AGTCCTTGACTCCCACCCATGTCACCCTCACAGCCCCCACGCAGCCTAGTGGTCACAGGCGGACTCCTTC
TGATGGGGCTCTTAAGCCAACAGCAGCCCCTGCAGTACTAGGCAGCAGGAGCCCCTCCAGCAATGGAATG
AGTCCCAGTCCTGGAACAGGCATGTTGAAAACTCCCAGTCCCAGCCGAGACCCAGGTGAATTTCCCCGTC
TCCCTGACCCCAATGTGGTCTTTCCCCCAACTCCAAGGCGCTGGAACACCCAGCGAGACTCTACCTTAGA
GAGACCCAAGACCCTGGAGTTTCTGCCTCGACCGCGTCCTTCTGCCAACCGGCAGCGACTGGACCCTTGG
TGGTTTGTGTCTCCCAGCCATGCCCGCAGCGCCTCCCCAGCTAACAGCTCCAGCACAGAAACACCCAGCA
ACCTGGACTCCTGCTTTGCCAGCAGCAGCAGCACTGTGGAAGAGCGGCCTGGACTTCCAGCCCTGCTCCC
TTTACAGGCAGGACCACTGCTCCCTGCTGAACGGACACTTTTGGACCTGGATGCTGAGGGGCAGAGCCAG
GATAGCACTGTGCCCCTATGCAGAGCTGAGCTGAATGCACACGGGCCTTCCCCATATGAGATCCAACAGG
AGTTCTGGTCTTAG

Translation (1077 aa):
MESSRSLLGCLASATAAPPGDDATGAGAEEEEDEEEAAAELGSHAALPYWTAVFEYEAAGEDELTLRLGD
VVEVLSKDSQVSGDEGWWTGQLNQRVGIFPSNYVTPRSAFSSRCQPGAEDPSCYPPIQLLEIDFAELTLE
EIIGIGGFGKVYRAFWAGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC
LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSN
KILKITDFGLAREWHRTTKMSAAGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV
AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTSILDQLTTIEESGFFEMPKDSFHCLQDDWK
HEIQEMFDQLRAKEKELRTWEEELTRAALQQKNQEELLRRREQELAEREIDILERELNIIIHQLCQEKPR
VKKRKGKFRKSRLKLKDGNRISLPSDFQHKFTVQASPTMDKRKSLISNRSSPPASPTIIPRLRAIQLTPG
ESSKTWGRSSVVPKEEGEEEEKRAPKKKGRTWGPGTLGQKELTSGDEGLKSLVDGYKQWSSSAPNLGKGP
RSSPALPGFTSLMEIEDEDSEGPGSGENHQQHSPNQSYLCIPFPRGEDGDGPSSDGVHEEPTPVNSATST
PQLTPTNSLKRGGTHHRRCEVALLGCGAVLAATGLGFDLLEAGKCQLLPPEEPEPPAREEKKRREGLFQR
ASRPRRSTSPPSRKLFKKEEPMTLLGDPSASLTLLSLSSISECNSTRSLLRSDSDEIVVYEMPVSPVEAP
PLTQCTHNPLVNVRVERFKRDPNQSLTPTHVTLTAPTQPSGHRRTPSDGALKPTAAPAVLGSRSPSSNGM
SPSPGTGMLKTPSPSRDPGEFPRLPDPNVVFPPTPRRWNTQRDSTLERPKTLEFLPRPRPSANRQRLDPW
WFVSPSHARSASPANSSSTETPSNLDSCFASSSSTVEERPGLPALLPLQAGPLLPAERTLLDLDAEGQSQ
DSTVPLCRAELNAHGPSPYEIQQEFWS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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