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Report for CCDS46963.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46963.1 Public Homo sapiens 3 TTC14 24 110 108 CCDS HistoryNCBI Gene:151613Re-query CCDS DB by CCDS ID:46963.1Re-query CCDS DB by GeneID:151613See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46963.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412756.6 ENSP00000413743.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412756.6Link to Ensembl Protein Viewer:ENSP00000413743.2Re-query CCDS DB by Nucleotide ID:ENST00000412756Re-query CCDS DB by Protein ID:ENSP00000413743
Original member Current member EBI ENST00000470669.5 ENSP00000419562.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000470669.5Link to Ensembl Protein Viewer:ENSP00000419562.1Re-query CCDS DB by Nucleotide ID:ENST00000470669Re-query CCDS DB by Protein ID:ENSP00000419562
Original member Current member NCBI NM_001042601.3 NP_001036066.1 Accepted alive Link to Nucleotide Sequence:NM_001042601.3Link to Protein Sequence:NP_001036066.1Re-query CCDS DB by Nucleotide ID:NM_001042601Re-query CCDS DB by Protein ID:NP_001036066Link to BLAST:NP_001036066.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036066.1 439 Q96N46-3 439 100% 0 0

Chromosomal Locations for CCDS 46963.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 180602262 180602422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180602891 180603015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180603124 180603323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180604225 180604309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180604478 180604607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180604852 180605007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180605766 180605837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180606253 180606372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180606481 180606603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180607648 180607795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAGCG
AACAGCAGGACAATCCACACTTCCGTAGCCTCCTGGGGTCGGCCGCCGAGCCAGCCCGGGGCCCGCCGCC
CCAGCACCCGTTGCAGGGCAGAAAAGAGAAGAGAGTTGACAACATCGAGATACAGAAATTCATCTCCAAA
AAAGCGGATCTGCTTTTTGCACTTTCCTGGAAATCAGATGCACCTGCAACTTCTGAAATTAATGAAGACA
GTGAAGATCATTATGCAATCATGCCACCTTTAGAGCAATTCATGGAGATACCTAGTATGGATCGGAGAGA
GCTGTTTTTCCGAGATATTGAGCGTGGTGATATAGTGATTGGAAGAATTAGTTCTATTCGGGAATTCGGT
TTTTTCATGGTGTTGATCTGTTTAGGAAGTGGTATCATGAGAGATATAGCCCACTTAGAAATCACAGCTC
TTTGTCCCTTAAGAGATGTGCCTTCTCACAGTAACCATGGGGATCCTTTATCATATTACCAAACTGGTGA
CATCATTCGAGCTGGAATCAAGGATATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCT
TCTCTTCCACCACACCTATCTGGTATTAAATTAGGTGTAATTAGCTCTGAAGAGCTTCCTTTATACTACA
GGAGAAGTGTTGAGCTAAATAGCAATTCTTTGGAGTCCTATGAAAATGTCATGCAGAGTTCCTTGGGATT
TGTTAATCCAGGAGTAGTTGAATTCCTTCTAGAAAAACTAGGAATAGATGAATCTAATCCACCATCTTTA
ATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAGATGATTTTGCTTCTGCATTGAGAAAAAAACAATCCG
CATCTTGGGCTTTAAAATGTGTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTAT
GAATGAATACAATAAAGCTTTGGAAATAGACAAACAAAACGTGGAAGCTTTGGTAGCTCGTGGAGCATTA
TATGCGACAAAAGGAAGTTTGAACAAAGCAATAGAAGATTTTGAGCTTGCATTAGAAAACTGTCCAACTC
ACAGAAATGCAAGAAAATACCTCTGCCAGACACTTGTAGAGAGAGGAGGACAGTTAGAAGAAGAAGAAAA
GTTTTTAAATGCTGAAAGTTACTATAAGAAAGCTTTGGCTTTGGATGAGACTTTTAAAGATGCAGAGGAT
GCTTTGCAGAAACTTCATAAATATATGCAGGTGATTCCTTATTTCCTCTTAGAAATTTAG

Translation (439 aa):
MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVDNIEIQKFISK
KADLLFALSWKSDAPATSEINEDSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFG
FFMVLICLGSGIMRDIAHLEITALCPLRDVPSHSNHGDPLSYYQTGDIIRAGIKDIDRYHEKLAVSLYSS
SLPPHLSGIKLGVISSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPPSL
MRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGAL
YATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDETFKDAED
ALQKLHKYMQVIPYFLLEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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