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Report for CCDS45933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45933.1 Public Homo sapiens 19 PRR22 24 110 108 CCDS HistoryNCBI Gene:163154Re-query CCDS DB by CCDS ID:45933.1Re-query CCDS DB by GeneID:163154See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45933.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000419421.3 ENSP00000407653.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000419421.3Link to Ensembl Protein Viewer:ENSP00000407653.2Re-query CCDS DB by Nucleotide ID:ENST00000419421Re-query CCDS DB by Protein ID:ENSP00000407653
Original member Current member NCBI NM_001134316.2 NP_001127788.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134316.2Link to Protein Sequence:NP_001127788.1Re-query CCDS DB by Nucleotide ID:NM_001134316Re-query CCDS DB by Protein ID:NP_001127788Link to BLAST:NP_001127788.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127788.1 422 Q8IZ63 422 100% 0 0

Chromosomal Locations for CCDS 45933.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5782978 5784053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5784377 5784439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5784531 5784660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGCAGCACCCCAAACCGTTCTGTGCCCCTGCAGCTCCCCAGGAAGGTTTCAGCCCGCAGAGTCTGGAGG
GGGCTGAGGTGCTGGGCAACCAGCCTGCTCCCACCTGTGCCGAGCCTCCTCCCGCTATGGGCTCCTTGAA
CCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTTTCCAGATGGCCCCA
TGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCC
TGTATAAGCTGGCAGCAAGCAGCGGGGGGCCAGCGGGGGTCCCCTCCGCCCCAGGCAGCTACCTCCTGGA
GCCTCAGCCCTACCTCAAGGCCCCGGGGCTGCCTCCATACCCCCACTACCAGCAGGCACCCGGGGGGCCC
CAGTTTCTCTTGCCCTACTTCCCGCCTGAGGGCCCCGGGCCAGAGGCTCTGGGTTTTGTGGGGGACGCAG
GGCCCGCCGCCTTCGTGGAGCTGCCCCTACCGCCCCTAGAGGAAGGCCCGGCCCCGCTGCCACCCCCACC
CCCCAAGGAGAACAAGCCGCCCCCTGTACTCATCACGCTGCCTGCAGAGCCCACACTGCCCCCAGACGCC
TACAGCCACCTCCAGGGTCACCTCGGCCACTTCCCTGGGCCCGAACCCCTGGCCTTCCCCGTCAAGGAGC
TGCAGGGCAGTGGGGCCCGACCTGGGGTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGA
GGTCAAGGAGGGGGCCCTGCTGGGAGCAGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTTTGGCACTG
CCTGACAAGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCTGAGG
GTACCCTGTGCGAGGTCCCTGGGCCGGCCCTGCCTGACAGCAGTGGTGGGAACTCAGCCGATGACATCCG
CTCGCTGTGCCTGCCCGAGGAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCC
AACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCCCACCCGGGGCCCCCTGCCA
CCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGGAAG
GAAGGCCAGGCAGCCGGCAGGCCCAGCCAGCGCCACTCCCCCGGGGCCCAGGGAGGACCTGGGAGCCACC
CCGCATTAA

Translation (422 aa):
MQHPKPFCAPAAPQEGFSPQSLEGAEVLGNQPAPTCAEPPPAMGSLNLYHPPDPEKEVFPAPPAGFQMAP
CGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGP
QFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDA
YSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALAL
PDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVS
NVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGAT
PH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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