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Report for CCDS45766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45766.1 Public Homo sapiens 17 VCF1 24 110 108 CCDS HistoryNCBI Gene:84923Re-query CCDS DB by CCDS ID:45766.1Re-query CCDS DB by GeneID:84923See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405159.8 ENSP00000384832.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000405159.8Link to Ensembl Protein Viewer:ENSP00000384832.3Re-query CCDS DB by Nucleotide ID:ENST00000405159Re-query CCDS DB by Protein ID:ENSP00000384832
Original member Current member NCBI NM_001098832.2 NP_001092302.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098832.2Link to Protein Sequence:NP_001092302.1Re-query CCDS DB by Nucleotide ID:NM_001098832Re-query CCDS DB by Protein ID:NP_001092302Link to BLAST:NP_001092302.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092302.1 207 Q969W3-2 207 100% 0 0

Chromosomal Locations for CCDS 45766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 73209529 73209768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73212678 73212740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73227165 73227264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73232086 73232306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGGGGGGCGCGGAGCAGACGCCGGAAGTAGTGGTGGTACGGGTCCGACTGAGGGGTACTCGCCACCGG
CTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACACAAC
CCCCTCTGTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGC
CTCCGTCCCAGGAAAAGGAGAAGGAATGGCAACGAAGAAGACAACCATCTTCCCCCCCAGACCAAAAGAA
GTAGCAGAAACCCTGTCTTTCAGGATTCCTGGGACACAGAGACAGTACCTGTAATGAGAAACAGTAAAGA
AAACAGACTAAGAGGAAACAAAGCGTTCTGCGCGTCTTCAGGCAGTGACAGTGGTGGGAGCAGCAGCAGC
AGCAGCAGCAGCATCAATAGCCCGGACAGGGCCAGCGGGCCGGAAGGCAGCTTGAGCCAGACCATGGCCG
GATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCACAT
CAACCAGACCCTGAGGGAGGCCCACTTCCACAGCCTACAGCACCGAGGGCGGCCTCTGACATGA

Translation (207 aa):
MGGRGADAGSSGGTGPTEGYSPPAASTRAAARAKARGGGRGGRRNTTPSVPSLRGAAPRSFHPPAAMSER
LRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTETVPVMRNSKENRLRGNKAFCASSGSDSGGSSSS
SSSSINSPDRASGPEGSLSQTMAGSSPNTPQPVPEQSALCQGLYFHINQTLREAHFHSLQHRGRPLT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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