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Report for CCDS45403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45403.1 Public Homo sapiens 16 SEC14L5 24 110 108 CCDS HistoryNCBI Gene:9717Re-query CCDS DB by CCDS ID:45403.1Re-query CCDS DB by GeneID:9717See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45403.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251170.12 ENSP00000251170.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251170.12Link to Ensembl Protein Viewer:ENSP00000251170.6Re-query CCDS DB by Nucleotide ID:ENST00000251170Re-query CCDS DB by Protein ID:ENSP00000251170
Original member Current member NCBI NM_014692.2 NP_055507.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014692.2Link to Protein Sequence:NP_055507.1Re-query CCDS DB by Nucleotide ID:NM_014692Re-query CCDS DB by Protein ID:NP_055507Link to BLAST:NP_055507.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055507.1 696 O43304 696 100% 0 0

Chromosomal Locations for CCDS 45403.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4959324 4959386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4987557 4987706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4988149 4988280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4990767 4990895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4991838 4992030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4996348 4996460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4996855 4997044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5000655 5000743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5000855 5000925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5003402 5003573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5005914 5006048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5007352 5007486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5008421 5008648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5011095 5011273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5014859 5014970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGGTGCAAAGATACCAGTCTCCTGTCCGAGTCTACAAGTACCCGTTTGAGCTGGTCATGGCGGCCTACG
AGAAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGCAG
CCCGGACGGGGCTGTGCACGTGGTGGAGCGGAGCTGCCGGCTGCGCGTGGACGCCCCGCGGCTGCTGCGG
AAGATCGCAGGTGTTGAGCACGTGGTCTTCGTGCAGACAAACATCTTGAACTGGAAGGAGAGGACGCTCC
TCATCGAAGCGCACAATGAGACCTTCGCCAACCGCGTGGTGGTGAACGAGCACTGCAGCTACACGGTCCA
CCCTGAGAATGAAGACTGGACTTGCTTCGAGCAGTCTGCCTCACTGGACATTCGGTCTTTCTTTGGCTTT
GAAAATGCCTTGGAGAAGATCGCCATGAAGCAGTACACCGCCAACGTCAAGAGGGGGAAGGAGGTGATTG
AGCATTACCTGAATGAGCTCATCTCCCAGGGTACCTCGCACATTCCGCGCTGGACGCCTGCCCCAGTCCG
TGAGGAGGATGCCCGCAACCAGGCTGGACCGAGGGACCCCAGCTCCCTGGAGGCCCACGGGCCCCGTAGC
ACCCTGGGGCCCGCTCTGGAGGCGGTCAGTATGGACGGGGACAAGCTGGATGCGGACTACATTGAGAGGT
GCCTGGGCCACCTCACGCCCATGCAGGAGAGCTGCCTGATCCAGCTTCGGCACTGGTTACAGGAGACCCA
CAAAGGCAAGATTCCCAAAGATGAGCACATCCTTCGGTTCCTGCGGGCTCATGACTTCCACCTGGACAAG
GCCCGGGAAATGCTGCGCCAGTCCTTGAGCTGGCGCAAGCAGCACCAGGTGGATCTCCTCCTTCAGACCT
GGCAACCCCCTGCCCTGCTGGAGGAGTTCTATGCAGGGGGCTGGCATTACCAGGACATAGATGGCCGCCC
CCTCTACATCCTCCGCCTGGGCCAGATGGACACCAAAGGCTTGATGAAGGCCGTGGGGGAGGAGGCGCTG
CTGCGGCATGTTCTCTCCGTCAACGAGGAAGGACAGAAGCGGTGTGAGGGGAGCACAAGGCAGCTGGGCC
GTCCCATCAGCTCCTGGACCTGCCTGCTAGACCTGGAGGGACTCAACATGCGGCACCTGTGGCGGCCGGG
GGTGAAGGCCCTGCTGCGGATGATTGAGGTGGTTGAGGACAATTACCCAGAGACCCTGGGTCGGCTGCTC
ATCGTGCGAGCCCCCCGAGTCTTCCCCGTGCTCTGGACACTGATCAGCCCCTTCATCAATGAGAACACCA
GGCGGAAGTTCCTCATCTACAGTGGCAGCAACTACCAGGGACCCGGAGGCCTTGTGGACTATCTGGATAG
AGAAGTGATCCCTGACTTCCTTGGGGGAGAGAGTGTGTGTAATGTCCCCGAAGGAGGGCTGGTCCCCAAG
TCCCTCTACATGACAGAAGAGGAGCAGGAGCACACGGACCAGCTGTGGCAGTGGAGTGAGACCTACCATT
CAGCCAGCGTGCTCCGCGGAGCCCCCCACGAGGTGGCCGTGGAGATCCTGGAAGGAGAGTCGGTCATCAC
CTGGGACTTTGACATCCTGCGAGGGGACGTGGTGTTCAGCCTGTACCACACCAAGCAGGCGCCCAGGCTG
GGCGCCCGGGAACCGGGGACCAGGGCCAGCGGGCAGCTGATCGACAAAGGCTGGGTCCTGGGCAGGGATT
ACAGCCGTGTGGAGGCTCCCCTTGTCTGCCGGGAGGGGGAGAGCATCCAGGGCTCCCATGTGACCCGGTG
GCCCGGCGTCTACCTGCTCCAGTGGCAAATGCACAGCCCCCCCAGCAGCGTGGCCTGCAGCCTCCCGGGT
GTGGACGATGTCCTGACGGCTCTGCACAGCCCCGGGCCCAAGTGCAAACTTCTCTACTACTGTGAGGTGC
TCGCCTCTGAGGACTTCAGGGGCTCCATGTCCAGCCTGGAATCCTGCACCAGCGGCTTCTCCCAGCTCAG
CGCCGCCACCTCGTCCTCCTCCTCCGGCCAGTCTCATAGCAGCTCCCTGGTCTCCAGATAG

Translation (696 aa):
MVQRYQSPVRVYKYPFELVMAAYEKRFPTCPQIPVFLGSEVLRESRSPDGAVHVVERSCRLRVDAPRLLR
KIAGVEHVVFVQTNILNWKERTLLIEAHNETFANRVVVNEHCSYTVHPENEDWTCFEQSASLDIRSFFGF
ENALEKIAMKQYTANVKRGKEVIEHYLNELISQGTSHIPRWTPAPVREEDARNQAGPRDPSSLEAHGPRS
TLGPALEAVSMDGDKLDADYIERCLGHLTPMQESCLIQLRHWLQETHKGKIPKDEHILRFLRAHDFHLDK
AREMLRQSLSWRKQHQVDLLLQTWQPPALLEEFYAGGWHYQDIDGRPLYILRLGQMDTKGLMKAVGEEAL
LRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLL
IVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGGESVCNVPEGGLVPK
SLYMTEEEQEHTDQLWQWSETYHSASVLRGAPHEVAVEILEGESVITWDFDILRGDVVFSLYHTKQAPRL
GAREPGTRASGQLIDKGWVLGRDYSRVEAPLVCREGESIQGSHVTRWPGVYLLQWQMHSPPSSVACSLPG
VDDVLTALHSPGPKCKLLYYCEVLASEDFRGSMSSLESCTSGFSQLSAATSSSSSGQSHSSSLVSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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