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Report for CCDS45308.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45308.1 Public Homo sapiens 15 GOLGA6D 24 110 108 CCDS HistoryNCBI Gene:653643Re-query CCDS DB by CCDS ID:45308.1Re-query CCDS DB by GeneID:653643See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45308.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434739.4 ENSP00000391085.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434739.4Link to Ensembl Protein Viewer:ENSP00000391085.3Re-query CCDS DB by Nucleotide ID:ENST00000434739Re-query CCDS DB by Protein ID:ENSP00000391085
Original member Current member NCBI NM_001145224.3 NP_001138696.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145224.3Link to Protein Sequence:NP_001138696.1Re-query CCDS DB by Nucleotide ID:NM_001145224Re-query CCDS DB by Protein ID:NP_001138696Link to BLAST:NP_001138696.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138696.1 693 P0CG33 693 100% 0 0

Chromosomal Locations for CCDS 45308.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75282876 75282959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75284650 75284769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75286693 75286773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75287629 75287667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75287929 75287979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75288080 75288161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75288258 75288364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75289397 75289483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75289592 75289699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75289892 75289979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75290381 75290889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75291166 75291234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75292565 75292640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75293073 75293164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75293729 75293831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75293915 75294018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75294108 75294261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75294348 75294475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2082 nt):
ATGTGGCCCCAACCCTACCTCCCTCCCCACCCCATGATGTTAGAAGAATCTCGACAGAATAAATTGGCAG
CAGCCAAGAAAAAGCTAAAAGAATATCAGCAAAGGAAGAGCCCTGGTATTCCAGCAGGAGCAAAGACAAA
AAAGAAAAAAACTGACAGTAGCCCTGAGACAACCACTTCCGGTGGTGGCCACTCACCTGGGGATAGCCAG
TACCAAGAACTAGCAGTAGCCCTGGAGTCAAGCTCAGTGACAATCAATCAGCTCAATGAAAACATAGAAT
CATTGAAACAGCAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGCAAAGAAAACAAACAATGAAATACA
CAAAGCACAAATGGAGCAGTTAGAGACAATCAACATCCTCACATTGGAAAAGGCAGACTTGAAGACCACC
CTTTACCATACTAAACGTGCTGCCCGACACTTCGAAGAAGAGTCCAAGGATCTGGCTGGCCGCCTGCAAT
ACTCCTTACAGCATATTCAAGAATTGGAGCGGGCTCTCTGTGCTGTGTCTACACAGCAGCAGGAAGAGGA
CAGGTCCTCGAGCTGCAGAGAAGCGGTCCTCCAGCGGCGGTTACAGCAGACCATAAAGGAGCGGGCGCTG
CTGAACGCACACGTGACACAGGTGACAGAGTCACTAAAACAAGTCCAGCTAGAGCGAGACGAATATGCTA
AACACATAAAAGGAGAGAGGGCCCGGTGGCAGGAGAGGATGTGGAAAATGTCGGTGGAGGCTCGAACATT
GAAGGAAGAGAAGAAGCGTGACATACATCGGATACAGGAGCTGGAGAGGAGCTTGTCCGAACTCAAAAAC
CAGATGGCTGAGCCCCCATCCCTGGCACCCCCAGCAGTGACCTCTGTGGTGGAACAGCTACAAGATGAGG
CCAAACACCTGAGGCAGGAGGTGGAAGGTCTGGAGGGAAAGCTCCAGTCCCAGGTGGAAAACAATCAGGC
CTTGAGTCTCCTTAGCAAGGAACAAAAGCAGAGACTCCAGGAGCAGGAGGAGATGCTCCGAGAGCAGGAG
GCGCAGAGAGTGCGGGAGCAGGAGAGACTGTGTGAACAAAACGAGAGGCTTCGGGAGCAGCAGAAGACGC
TACAGGAGCAGGGTGAGAGGCTGCGAAAGCAGGAGCAGAGGCTACGCAAACAGGAGGAGAGGCTGCGAAA
GGAGGAGGAGAGGCTGCAAAAGCAGGAAAAGAGGCTGTGGGACCAGGAGGAGAGGCTGTGGAAGAAGGAG
GAGAGGCTACAAAAGCAGGAGGAGAGGCTCGCGCTCTCCCAGAACCACAAGCTCGACAAGCAGCTGGCCG
AGCCACAGTGCAGCTTCGAGGATCTGAACAACGAGAAAAAGAGCGCACTGCAGTTGGAGCAGCAAGTAAA
GGAGCTGCAGGAGAAGCTAGACGAGGAGCACCTAGAAGCTGCCAGCCAGCGGAACCAACAGCTAGAGACC
CAGCTAAGCCTCGTGGCTCTCCCTGGAGAAGGAGATGGAGGACAACATCTGGACAGTGAGGAGGAGGAGG
CGCCTCGGCCCACGCCAAACATCCCAGAGGACCTGGAGAGCCGGGAGGCCACGAGCAGCTTTATGGACCT
CCCGAAGGAGAAGGCGGACGGGACGGAGCAGGTGGAGAGACGAGAGCTTGGATTCGTCCAGCCTTCTGGA
GTGACAGACGGCATGAGAGAGTCCTTCACCGTATATGAAAGCCAGGGGGCAGTGCCAAACACGCGGCACC
AGGAGATGGAGGATGTCATCAGGCTGGCCCAGAAGGAGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCA
AGAGTTGGTGTTGCCCCTTGTGGGCAACCATGAGGGGCATGGCAAATTCCTCATCGCTGCCCAGAACCCT
GCTGATGAGCCCACTCCAGGGGCCCCAGCCCCCCAGGAACTTGGGGCTGCCGGTGAGCAGGATGTTTTTT
ATGAAGTGAGCCTGGACAACAACGTGGAGCCTGCACCAGGAGTGGCCAGGGAGGGTTCTCCCCATAACAA
CCCCACTGTACAGCAGATCGTGCAGCTGTCTCCTGTCATGCAGGACACCTAG

Translation (693 aa):
MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDSSPETTTSGGGHSPGDSQ
YQELAVALESSSVTINQLNENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMEQLETINILTLEKADLKTT
LYHTKRAARHFEEESKDLAGRLQYSLQHIQELERALCAVSTQQQEEDRSSSCREAVLQRRLQQTIKERAL
LNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLSELKN
QMAEPPSLAPPAVTSVVEQLQDEAKHLRQEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQE
AQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKE
ERLQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQRNQQLET
QLSLVALPGEGDGGQHLDSEEEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQVERRELGFVQPSG
VTDGMRESFTVYESQGAVPNTRHQEMEDVIRLAQKEEEMKVKLLELQELVLPLVGNHEGHGKFLIAAQNP
ADEPTPGAPAPQELGAAGEQDVFYEVSLDNNVEPAPGVAREGSPHNNPTVQQIVQLSPVMQDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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