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Report for CCDS45014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45014.1 Public Homo sapiens 13 TPTE2 24 110 108 CCDS HistoryNCBI Gene:93492Re-query CCDS DB by CCDS ID:45014.1Re-query CCDS DB by GeneID:93492See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 45014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000696858.2 ENSP00000512931.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696858.2Link to Ensembl Protein Viewer:ENSP00000512931.1Re-query CCDS DB by Nucleotide ID:ENST00000696858Re-query CCDS DB by Protein ID:ENSP00000512931
Original member Current member EBI ENST00000696988.1 ENSP00000513024.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696988.1Link to Ensembl Protein Viewer:ENSP00000513024.1Re-query CCDS DB by Nucleotide ID:ENST00000696988Re-query CCDS DB by Protein ID:ENSP00000513024
Original member Current member EBI ENST00000697147.1 ENSP00000513136.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000697147.1Link to Ensembl Protein Viewer:ENSP00000513136.1Re-query CCDS DB by Nucleotide ID:ENST00000697147Re-query CCDS DB by Protein ID:ENSP00000513136
Original member Current member NCBI NM_001395978.1 NP_001382907.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395978.1Link to Protein Sequence:NP_001382907.1Re-query CCDS DB by Nucleotide ID:NM_001395978Re-query CCDS DB by Protein ID:NP_001382907Link to BLAST:NP_001382907.1
Original member Current member NCBI NM_199254.3 NP_954863.2 Accepted alive Link to Nucleotide Sequence:NM_199254.3Link to Protein Sequence:NP_954863.2Re-query CCDS DB by Nucleotide ID:NM_199254Re-query CCDS DB by Protein ID:NP_954863Link to BLAST:NP_954863.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382907.1 522 Q6XPS3-1 522 100% 0 0
NP_954863.2 522 Q6XPS3-1 522 100% 0 0

Chromosomal Locations for CCDS 45014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 19423062 19423164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19424947 19425017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19426425 19426517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19430468 19430547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19432473 19432578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19436226 19436306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19438092 19438153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19450076 19450164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19450263 19450344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19451165 19451225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19464456 19464520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19465255 19465318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19465465 19465564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19467225 19467344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19473914 19474075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19475573 19475623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19482488 19482547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19492850 19492903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19493448 19493501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19503224 19503234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1569 nt):
ATGAATGAAAGTCCACAGACAAACGAATTTAAAGGAACAACCGAGGAGGCACCTGCGAAAGAAAGCCCAC
ACACAAGTGAATTTAAAGGAGCAGCCCTGGTGTCACCTATCAGTAAAAGTATGTTAGAACGACTTTCCAA
GTTTGAAGTTGAAGATGCTGAAAATGTTGCTTCATATGACAGCAAGATTAAGAAAATTGTGCATTCAATT
GTATCATCCTTTGCATTTGGAATATTTGGAGTTTTCCTGGTCTTACTGGATGTCACTCTCCTCCTTGCCG
ACCTAATTTTCACTGACAGCAAACTTTATATTCCTTTGGAGTATCGTTCTATTTCTCTAGCTATTGGCTT
ATTTTTTCTCATGGATGTTCTTCTTCGAGTATTTGTAGAAGGGAGACAGCAGTATTTTTCTGACTTATTT
AACATTTTAGATACTGCCATTATTGTGATTCCTCTGCTGGTTGATGTCATTTACATTTTTTTTGACATTA
AGTTGCTTAGGAATATTCCCAGATGGACACATTTAGTTCGACTTCTACGACTTATTATTCTGATAAGAAT
TTTTCATCTGCTTCATCAAAAAAGACAACTTGAAAAGCTGATGAGAAGGCTGGTTTCAGAAAACAAAAGG
CGATACACAAGGGATGGATTTGACCTAGACCTCACTTACGTTACAGAACGTATTATTGCTATGTCATTTC
CATCTTCTGGAAGGCAGTCTTTCTATAGAAATCCAATTGAGGAAGTTGTGCGGTTTCTAGATAAGAAACA
TCGAAACCACTATCGAGTCTACAATCTATGCAGTGAAAGAGCTTATGATCCTAAGCACTTCCATAATAGG
GTCAGTAGAATCATGATTGATGATCATAATGTCCCCACTCTACATGAGATGGTGGTTTTCACCAAGGAAG
TAAATGAGTGGATGGCTCAAGATCTTGAAAACATCGTAGCGATTCACTGTAAAGGAGGCAAAGGAAGAAC
CGGGACTATGGTTTGTGCCCTCCTTATTGCCTCCGAAATATTTTTAACTGCCGAGGAAAGCCTATATTAT
TTTGGAGAAAGGCGAACCAATAAAACCCACAGCAATAAATTTCAGGGAGTAGAAACTCCTTCTCAGAATA
GATATGTTGGATATTTTGCACAAGTGAAACATCTCTACAACTGGAATCTCCCTCCAAGACGGATACTCTT
TATAAAAAGATTCATTATTTATTCGATTCGTGGTGATGTATGTGATCTAAAAGTCCAAGTAGTAATGGAG
AAAAAGGTTGTCTTTTCCAGTACTTCATTAGGAAATTGTTCGATATTGCATGACATTGAAACAGACAAAA
TATTAATTAATGTATATGACGGTCCACCTCTGTATGATGATGTGAAAGTGCAGTTTTTCTCTTCGAATCT
TCCTAAATACTATGACAATTGTCCATTTTTCTTCTGGTTCAACACGTCTTTTATTCAAAATAACAGGCTT
TGTCTACCAAGAAATGAATTGGATAATCCACATAAACAAAAAGCATGGAAAATTTATCCACCAGAATTTG
CTGTGGAGATACTTTTTGGCGAGAAATGA

Translation (522 aa):
MNESPQTNEFKGTTEEAPAKESPHTSEFKGAALVSPISKSMLERLSKFEVEDAENVASYDSKIKKIVHSI
VSSFAFGIFGVFLVLLDVTLLLADLIFTDSKLYIPLEYRSISLAIGLFFLMDVLLRVFVEGRQQYFSDLF
NILDTAIIVIPLLVDVIYIFFDIKLLRNIPRWTHLVRLLRLIILIRIFHLLHQKRQLEKLMRRLVSENKR
RYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNR
VSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCKGGKGRTGTMVCALLIASEIFLTAEESLYY
FGERRTNKTHSNKFQGVETPSQNRYVGYFAQVKHLYNWNLPPRRILFIKRFIIYSIRGDVCDLKVQVVME
KKVVFSSTSLGNCSILHDIETDKILINVYDGPPLYDDVKVQFFSSNLPKYYDNCPFFFWFNTSFIQNNRL
CLPRNELDNPHKQKAWKIYPPEFAVEILFGEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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