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Report for CCDS44955.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44955.1 Public Homo sapiens 12 NEDD1 24 110 108 CCDS HistoryNCBI Gene:121441Re-query CCDS DB by CCDS ID:44955.1Re-query CCDS DB by GeneID:121441See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44955.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000557644.5 ENSP00000451211.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557644.5Link to Ensembl Protein Viewer:ENSP00000451211.1Re-query CCDS DB by Nucleotide ID:ENST00000557644Re-query CCDS DB by Protein ID:ENSP00000451211
Original member Current member NCBI NM_001135175.2 NP_001128647.1 Accepted alive Link to Nucleotide Sequence:NM_001135175.2Link to Protein Sequence:NP_001128647.1Re-query CCDS DB by Nucleotide ID:NM_001135175Re-query CCDS DB by Protein ID:NP_001128647Link to BLAST:NP_001128647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128647.1 667 Q8NHV4-3 667 100% 0 0

Chromosomal Locations for CCDS 44955.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 96907612 96907624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96909752 96909895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96912723 96912817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96917621 96917737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96919985 96920125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96934976 96935205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96936611 96936812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96937198 96937393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96940409 96940537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96942577 96942624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96943560 96943762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96944639 96944795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96945693 96945849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96951432 96951498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96951949 96952053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGCATTTTACAGGCGCAGTCATGCAGGAAAACCTCAGATTTGCTTCATCAGGAGATGATATTAAAATAT
GGGATGCTTCATCTATGACATTGGTGGATAAATTCAACCCACACACATCACCACATGGAATCAGCTCAAT
ATGTTGGAGCAGCAATAATAACTTTTTAGTAACAGCATCTTCCAGTGGCGACAAAATAGTTGTCTCAAGT
TGCAAATGTAAACCTGTTCCACTTTTAGAGCTTGCTGAAGGGCAAAAGCAGACATGTGTCAATTTAAATT
CTACATCTATGTATTTGGTAAGCGGAGGCCTAAATAACACTGTTAATATTTGGGATTTAAAATCAAAAAG
AGTTCATCGATCTCTTAAGGATCATAAAGATCAAGTAACTTGTGTAACATACAATTGGAATGATTGCTAC
ATTGCTTCTGGATCTCTTAGTGGTGAAATTATTTTACACAGTGTAACCACTAATTTATCTAGTACTCCTT
TTGGCCATGGTAGTAACCAGTCTGTTCGGCACTTGAAGTACTCCTTGTTTAAGAAATCACTACTGGGCAG
TGTTTCGGATAATGGAATAGTAACTCTCTGGGATGTAAATAGTCAGAGTCCATACCATAACTTTGACAGT
GTACACAAAGCTCCAGCGTCAGGCATCTGTTTTTCTCCTGTCAATGAATTGCTCTTTGTAACCATAGGCT
TGGATAAAAGAATCATCCTCTATGACACTTCAAGTAAGAAGCTAGTGAAAACTTTAGTGGCTGACACTCC
TCTAACTGCGGTAGATTTCATGCCTGATGGAGCCACTTTGGCTATTGGATCTTCCCGGGGGAAAATATAT
CAATATGATTTAAGAATGTTGAAATCACCAGTTAAGACCATCAGTGCTCACAAGACATCTGTGCAGTGTA
TAGCATTTCAGTACTCCACTGTTCTTACTAAGTCAAGTTTAAATAAAGGCTGTTCAAATAAGCCCACAAC
AGTGAACAAACGAAGTGTTAATGTGAATGCTGCTAGTGGAGGAGTTCAGAATTCCGGAATTGTCAGAGAA
GCACCTGCCACGTCCATTGCCACAGTTCTACCACAACCTATGACATCAGCTATGGGGAAAGGAACAGTTG
CTGTTCAAGAAAAAGCAGGTTTGCCTCGAAGCATAAACACAGACACTTTATCTAAGGAAACAGACAGTGG
AAAAAATCAGGATTTCTCCAGCTTTGATGATACTGGGAAAAGTAGTTTAGGTGACATGTTCTCACCTATC
AGAGATGATGCTGTAGTTAACAAGGGAAGTGATGAGTCCATAGGCAAAGGAGATGGCTTTGACTTTCTAC
CGCAGTTGAACTCAGTGTTTCCTCCAAGAAAAAATCCAGTAACTTCAAGTACTTCAGTATTGCATTCTAG
TCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAGAGGAAAATGAAAACCGTGATCTAACAGCTGAGTCT
AAGAAAATATATATGGGAAAACAGGAATCTAAAGACTCCTTCAAACAGTTAGCAAAGTTGGTCACATCTG
GTGCTGAAAGTGGAAATCTAAATACCTCTCCATCATCTAACCAAACAAGAAATTCTGAGAAATTTGAAAA
GCCAGAGAATGAAATTGAAGCCCAGTTGATATGTGAACCCCCAATCAATGGATCCTCAACTCCAAATCCA
AAGATAGCATCTTCTGTCACTGCTGGAGTTGCCAGTTCACTCTCAGAAAAAATAGCCGACAGCATTGGAA
ATAACCGGCAAAATGCACCATTGACTTCCATTCAAATTCGTTTTATTCAGAACATGATACAGGAAACGTT
GGATGACTTTAGAGAAGCATGCCATAGGGACATTGTGAATTTGCAAGTGGAGATGATTAAACAGTTTCAT
ATGCAACTGAATGAAATGCATTCTTTGCTGGAAAGATACTCAGTGAATGAAGGTTTAGTGGCTGAAATTG
AAAGACTACGAGAAGAAAACAAAAGATTACGGGCCCACTTTTGA

Translation (667 aa):
MHFTGAVMQENLRFASSGDDIKIWDASSMTLVDKFNPHTSPHGISSICWSSNNNFLVTASSSGDKIVVSS
CKCKPVPLLELAEGQKQTCVNLNSTSMYLVSGGLNNTVNIWDLKSKRVHRSLKDHKDQVTCVTYNWNDCY
IASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDS
VHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIY
QYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVRE
APATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLGDMFSPI
RDDAVVNKGSDESIGKGDGFDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAES
KKIYMGKQESKDSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPINGSSTPNP
KIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFH
MQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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