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Report for CCDS44271.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44271.1 Public Homo sapiens 1 RGS4 24 110 108 CCDS HistoryNCBI Gene:5999Re-query CCDS DB by CCDS ID:44271.1Re-query CCDS DB by GeneID:5999See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44271.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367908.8 ENSP00000356884.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367908.8Link to Ensembl Protein Viewer:ENSP00000356884.4Re-query CCDS DB by Nucleotide ID:ENST00000367908Re-query CCDS DB by Protein ID:ENSP00000356884
Original member Current member NCBI NM_001113381.1 NP_001106852.1 Accepted alive Link to Nucleotide Sequence:NM_001113381.1Link to Protein Sequence:NP_001106852.1Re-query CCDS DB by Nucleotide ID:NM_001113381Re-query CCDS DB by Protein ID:NP_001106852Link to BLAST:NP_001106852.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106852.1 93 P49798-4 93 100% 0 0

Chromosomal Locations for CCDS 44271.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 163069485 163069528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 163072395 163072499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 163072805 163072866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 163074321 163074391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (282 nt):
ATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCTTGCTTGAGGAGTGCAAAAGATATGAAACATCGGCTAG
GTTTCCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTAT
TTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATCACTGGAAAACCTGATTAGTCATGAA
TGTGAACCTGGATTCTTGCACCAGGGAAGAGACAAGCCGGAACATGCTAGAGCCTACAATAACCTGCTTT
GA

Translation (93 aa):
MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHE
CEPGFLHQGRDKPEHARAYNNLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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