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Report for CCDS44216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44216.1 Public Homo sapiens 1 RPRD2 24 110 108 CCDS HistoryNCBI Gene:23248Re-query CCDS DB by CCDS ID:44216.1Re-query CCDS DB by GeneID:23248See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369068.5 ENSP00000358064.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369068.5Link to Ensembl Protein Viewer:ENSP00000358064.4Re-query CCDS DB by Nucleotide ID:ENST00000369068Re-query CCDS DB by Protein ID:ENSP00000358064
Original member Current member NCBI NM_015203.5 NP_056018.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015203.5Link to Protein Sequence:NP_056018.2Re-query CCDS DB by Nucleotide ID:NM_015203Re-query CCDS DB by Protein ID:NP_056018Link to BLAST:NP_056018.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056018.2 1461 Q5VT52-1 1461 100% 0 0

Chromosomal Locations for CCDS 44216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150364715 150364919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150417596 150417725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150440923 150441023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150441881 150441958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150443231 150443283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150444251 150444377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150446226 150446401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150457288 150457570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150460060 150460317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150464527 150464727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150470561 150473334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4386 nt):
ATGGCGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCTCCTCGTCGGCCTCTTCGGCAGGGGCTCTGG
AGTCCTCGTTGGATCGAAAATTCCAGTCGGTAACCAACACCATGGAGTCCATTCAAGGCTTGTCGTCTTG
GTGTATAGAGAACAAAAAACACCACAGTACTATCGTCTATCATTGGATGAAGTGGCTCCGGAGATCTGCA
TATCCCCACCGTTTGAATCTCTTTTACCTTGCCAATGATGTCATACAGAACTGTAAAAGGAAAAATGCAA
TCATATTCCGTGAATCATTTGCTGATGTACTTCCTGAAGCAGCTGCTCTAGTGAAGGATCCATCTGTCTC
TAAGTCTGTAGAACGAATCTTTAAAATCTGGGAAGATAGAAATGTATACCCAGAAGAAATGATTGTGGCA
TTGAGAGAAGCTTTGAGTACCACTTTCAAAACTCAGAAGCAGCTGAAAGAAAATCTGAACAAACAACCGA
ATAAGCAGTGGAAGAAATCACAAACATCTACAAATCCAAAAGCTGCTCTCAAGTCTAAGATAGTTGCTGA
ATTTCGATCTCAGGCCCTAATTGAAGAGCTGTTGCTATACAAGCGCTCAGAAGATCAGATAGAACTGAAG
GAAAAGCAGTTGTCAACTATGAGGGTGGATGTGTGCAGCACAGAAACTCTCAAATGCTTAAAAGATAAAA
CAGGTGGGAAGAAGTTCTCCAAAGAATTTGAAGAGGCAAGCTCCAAGCTGGAAGAATTTGTGAATGGATT
AGATAAGCAGGTGAAAAACGGACCCTCATTAACAGAAGCACTGGAAAATGCTGGAATTTTCTATGAAGCA
CAATACAAAGAAGTAAAAGTGGTGGCTAATGCATATAAAACCTTTGCTAACCGAGTAAACAATTTAAAGA
AGAAGTTGGATCAATTGAAGTCAACCCTTCCAGATCCTGAAGAATCACCAGTTCCTTCCCCAAGCATGGA
CGCTCCCTCCCCGACTGGTTCTGAGTCTCCTTTTCAGGGAATGGGAGGTGAGGAATCCCAGTCACCAACC
ATGGAGAGTGAGAAATCTGCCACACCTGAACCTGTGACAGATAATCGTGATGTGGAAGACATGGAACTCT
CAGATGTGGAAGATGATGGGTCAAAAATCATTGTCGAGGACAGGAAGGAAAAACCTGCAGAGAAGTCAGC
TGTATCCACTTCTGTACCTACAAAGCCAACAGAAAATATCTCAAAGGCCTCTTCATGTACCCCAGTGCCT
GTGACCATGACAGCAACTCCACCTCTTCCAAAGCCTGTGAATACTTCTCTTTCCCCTTCCCCAGCATTGG
CTTTGCCAAACCTGGCTAATGTGGATCTGGCAAAGATCAGTTCCATCCTTAGCAGTTTAACATCAGTCAT
GAAAAATACTGGGGTCAGTCCTGCATCAAGACCTTCTCCAGGAACGCCCACCAGCCCCAGCAACCTCACC
AGTGGCCTGAAAACACCTGCACCTGCCACGACAACATCTCACAACCCTCTGGCAAATATCCTCTCCAAGG
TGGAGATCACCCCAGAGAGCATTCTGTCTGCACTTTCCAAAACCCAGACACAGTCAGCCCCTGCACTGCA
AGGCCTGTCATCTTTACTTCAGAGTGTTACTGGGAACCCAGTTCCAGCCAGTGAAGCTGCCTCACAGAGC
ACTTCAGCCTCCCCTGCCAACACCACAGTCTCTACCATAAAGGGAAGAAATCTGCCCTCCAGTGCCCAAC
CTTTTATTCCCAAAAGCTTCAACTATTCTCCTAACTCATCAACTTCTGAAGTCTCTTCAACTTCAGCCAG
CAAGGCCTCAATTGGGCAAAGCCCAGGGCTCCCAAGCACTACTTTTAAACTACCTTCCAACTCTTTGGGG
TTTACAGCTACCCACAATACTAGCCCTGCTGCCCCACCTACTGAAGTTACCATCTGCCAATCTTCAGAGG
TCTCCAAGCCAAAGCTGGAGTCAGAGTCCACCTCCCCAAGCCTGGAAATGAAGATTCACAACTTCTTAAA
AGGTAATCCTGGTTTCAGTGGCTTAAACTTAAACATCCCAATCCTGAGCAGTTTGGGGTCCAGCGCCCCA
TCAGAGAGCCATCCCTCAGACTTCCAGCGTGGCCCTACTAGCACCTCAATCGACAACATTGATGGAACCC
CTGTACGGGATGAACGGAGTGGGACACCCACCCAGGATGAGATGATGGACAAGCCCACATCCAGCAGTGT
AGATACTATGTCCCTGCTTTCTAAGATCATTAGCCCTGGTTCCTCAACACCCAGCAGTACAAGATCACCA
CCCCCTGGGAGAGATGAAAGCTACCCCCGAGAGCTCTCCAATTCTGTATCTACATATCGACCCTTTGGTC
TGGGCAGTGAATCTCCCTATAAGCAGCCTTCTGATGGAATGGAGAGACCATCTTCCCTGATGGACTCTTC
ACAGGAAAAGTTCTACCCAGATACTTCTTTCCAAGAAGATGAGGATTACCGAGATTTTGAGTATTCAGGG
CCTCCACCCTCTGCCATGATGAACCTAGAGAAGAAACCAGCCAAATCTATCCTGAAATCAAGCAAGCTGT
CTGATACCACCGAGTACCAGCCAATTCTGTCCAGTTATAGCCACAGAGCCCAAGAATTTGGGGTAAAGTC
TGCCTTCCCTCCATCTGTAAGGGCCCTCCTGGACTCTAGTGAGAACTGTGACCGTCTCTCATCTTCCCCT
GGGCTATTTGGTGCCTTCAGCGTAAGAGGGAATGAACCTGGGTCTGACCGGTCACCATCACCGAGTAAGA
ATGATTCATTTTTCACCCCTGACTCCAACCACAATAGCTTGTCTCAATCTACCACTGGGCATCTCAGTTT
GCCACAGAAGCAGTACCCAGACTCTCCTCACCCAGTCCCACATCGTTCCCTTTTCTCTCCGCAGAACACC
CTTGCCGCTCCCACGGGTCACCCACCCACGTCAGGCGTGGAGAAAGTCCTGGCCTCCACCATTTCCACCA
CGTCGACGATTGAATTTAAGAATATGCTTAAAAACGCCTCACGTAAGCCCTCAGATGATAAGCATTTTGG
CCAGGCTCCCAGCAAGGGCACTCCAAGTGATGGTGTCAGTCTCTCAAACCTCACCCAACCCAGCTTGACC
GCCACTGATCAGCAGCAACAAGAAGAGCACTACCGCATAGAAACCCGCGTCTCCTCCTCCTGCTTAGACT
TGCCTGATAGCACAGAAGAAAAGGGGGCCCCTATAGAAACCTTGGGTTATCACAGTGCATCCAATAGGAG
GATGTCAGGGGAGCCGATCCAGACCGTAGAGTCCATCCGAGTTCCTGGGAAGGGAAATAGAGGACATGGG
CGTGAGGCTTCAAGGGTGGGTTGGTTTGATCTGAGCACATCAGGTAGCTCTTTTGACAATGGCCCTTCAA
GTGCCTCTGAGTTGGCATCCCTTGGGGGTGGGGGCAGCGGAGGCCTCACTGGCTTTAAAACAGCACCATA
CAAGGAACGGGCACCTCAATTTCAGGAGAGTGTCGGCAGCTTTCGTTCCAACAGTTTCAACTCAACATTT
GAGCATCATCTTCCCCCATCCCCCTTGGAACATGGGACACCCTTCCAGAGAGAGCCAGTGGGGCCATCAT
CTGCCCCACCTGTCCCTCCTAAGGATCATGGTGGTATCTTCTCTCGAGATGCACCCACTCATCTACCCTC
TGTGGATCTTTCGAACCCCTTCACAAAGGAGGCAGCCCTGGCCCATGCTGCCCCACCCCCTCCTCCTGGA
GAGCACAGTGGAATTCCTTTCCCTACCCCACCTCCTCCTCCCCCTCCTGGGGAACATAGCAGCAGTGGTG
GGAGTGGTGTCCCCTTTTCTACTCCACCCCCTCCTCCACCCCCTGTTGACCACTCTGGAGTTGTACCCTT
CCCAGCCCCACCACTGGCAGAGCACGGAGTGGCAGGGGCTGTGGCAGTATTTCCCAAGGACCATAGTTCC
CTCCTTCAAGGGACCCTGGCTGAGCATTTTGGGGTACTCCCAGGACCCAGGGACCACGGGGGCCCCACCC
AACGGGACCTCAACGGCCCTGGCCTTAGCCGTGTACGAGAGAGCCTCACCCTACCCTCCCATTCTCTGGA
ACACCTGGGCCCACCCCATGGAGGAGGAGGTGGGGGAGGCAGCAACAGCAGCAGTGGCCCCCCCTTGGGT
CCCTCACACAGAGACACCATCAGCCGGAGTGGTATAATCTTACGGAGTCCCCGGCCAGACTTTCGGCCTA
GGGAACCTTTTCTCAGCAGAGACCCATTTCACAGTTTAAAGAGACCCAGGCCACCTTTTGCTAGGGGCCC
TCCGTTCTTTGCACCAAAACGCCCATTCTTCCCTCCCAGGTACTGA

Translation (1461 aa):
MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSA
YPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKSVERIFKIWEDRNVYPEEMIVA
LREALSTTFKTQKQLKENLNKQPNKQWKKSQTSTNPKAALKSKIVAEFRSQALIEELLLYKRSEDQIELK
EKQLSTMRVDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEA
QYKEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEESQSPT
MESEKSATPEPVTDNRDVEDMELSDVEDDGSKIIVEDRKEKPAEKSAVSTSVPTKPTENISKASSCTPVP
VTMTATPPLPKPVNTSLSPSPALALPNLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPSNLT
SGLKTPAPATTTSHNPLANILSKVEITPESILSALSKTQTQSAPALQGLSSLLQSVTGNPVPASEAASQS
TSASPANTTVSTIKGRNLPSSAQPFIPKSFNYSPNSSTSEVSSTSASKASIGQSPGLPSTTFKLPSNSLG
FTATHNTSPAAPPTEVTICQSSEVSKPKLESESTSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAP
SESHPSDFQRGPTSTSIDNIDGTPVRDERSGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSSTRSP
PPGRDESYPRELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEKFYPDTSFQEDEDYRDFEYSG
PPPSAMMNLEKKPAKSILKSSKLSDTTEYQPILSSYSHRAQEFGVKSAFPPSVRALLDSSENCDRLSSSP
GLFGAFSVRGNEPGSDRSPSPSKNDSFFTPDSNHNSLSQSTTGHLSLPQKQYPDSPHPVPHRSLFSPQNT
LAAPTGHPPTSGVEKVLASTISTTSTIEFKNMLKNASRKPSDDKHFGQAPSKGTPSDGVSLSNLTQPSLT
ATDQQQQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHSASNRRMSGEPIQTVESIRVPGKGNRGHG
REASRVGWFDLSTSGSSFDNGPSSASELASLGGGGSGGLTGFKTAPYKERAPQFQESVGSFRSNSFNSTF
EHHLPPSPLEHGTPFQREPVGPSSAPPVPPKDHGGIFSRDAPTHLPSVDLSNPFTKEAALAHAAPPPPPG
EHSGIPFPTPPPPPPPGEHSSSGGSGVPFSTPPPPPPPVDHSGVVPFPAPPLAEHGVAGAVAVFPKDHSS
LLQGTLAEHFGVLPGPRDHGGPTQRDLNGPGLSRVRESLTLPSHSLEHLGPPHGGGGGGGSNSSSGPPLG
PSHRDTISRSGIILRSPRPDFRPREPFLSRDPFHSLKRPRPPFARGPPFFAPKRPFFPPRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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