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Report for CCDS42574.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42574.1 Public Homo sapiens 19 ZNF229 24 110 108 CCDS HistoryNCBI Gene:7772Re-query CCDS DB by CCDS ID:42574.1Re-query CCDS DB by GeneID:7772See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42574.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614049.5 ENSP00000479884.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614049.5Link to Ensembl Protein Viewer:ENSP00000479884.1Re-query CCDS DB by Nucleotide ID:ENST00000614049Re-query CCDS DB by Protein ID:ENSP00000479884
Original member Current member NCBI NM_014518.4 NP_055333.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014518.4Link to Protein Sequence:NP_055333.3Re-query CCDS DB by Nucleotide ID:NM_014518Re-query CCDS DB by Protein ID:NP_055333Link to BLAST:NP_055333.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055333.3 825 Q9UJW7-1 825 100% 0 0

Chromosomal Locations for CCDS 42574.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44428303 44430542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44432222 44432366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44442563 44442621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44442814 44442847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2478 nt):
ATGGAGACTTTGACCTCAAGGCATGAGAAAAGAGCTCTTCATTCTCAAGCCTCAGCCATTTCCCAAGATA
GGGAGGAGAAGATCATGTCTCAGGAGCCATTGAGCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAGGA
GCTAGAGCTGCTGGACTCTACCCAGAGGCAGCTGTACCAAGATGTGATGCAGGAGAATTTCAGGAACCTA
CTCTCAGTGGGTGAGAGGAATCCTCTGGGAGACAAGAATGGAAAGGATACGGAGTATATTCAAGATGAAG
AATTAAGGTTCTTTTCACACAAAGAGCTCTCCTCATGCAAAATCTGGGAAGAGGTGGCAGGTGAATTACC
TGGGAGCCAAGACTGTAGAGTAAATCTGCAAGGAAAAGACTTCCAGTTCTCAGAAGATGCTGCTCCCCAT
CAAGGGTGGGAAGGAGCATCTACGCCGTGTTTTCCAATTGAGAATTTCCTGGACAGTCTACAAGGGGATG
GGCTTATCGGTCTAGAAAATCAACAGTTTCCAGCCTGGAGAGCTATAAGACCAATCCCCATTCAAGGATC
TTGGGCAAAAGCGTTTGTGAACCAGTTAGGGGATGTTCAAGAAAGATGTAAAAATCTCGACACAGAAGAC
ACAGTATATAAATGTAACTGGGATGATGACAGCTTTTGCTGGATATCTTGTCATGTTGATCACAGATTCC
CTGAAATAGACAAGCCGTGTGGTTGCAATAAATGCAGAAAAGACTGCATTAAAAACTCTGTACTTCATCG
CATTAACCCTGGAGAGAATGGCTTGAAAAGTAACGAATACAGAAATGGCTTCAGGGACGATGCAGACCTT
CCCCCGCATCCAAGAGTACCTTTGAAAGAGAAACTCTGTCAATATGATGAGTTTAGTGAGGGCTTGAGGC
ACAGTGCCCATCTTAACAGACATCAAAGAGTTCCCACAGGAGAGAAATCTGTTAAGAGTCTTGAGCGTGG
TCGGGGCGTCAGACAGAACACGCACATACGTAACCACCCCAGAGCCCCTGTGGGAGACATGCCCTATAGA
TGTGATGTCTGTGGAAAGGGGTTCAGGTATAAATCGGTTCTTCTTATTCATCAAGGGGTGCACACAGGAA
GGAGACCCTATAAATGTGAGGAGTGTGGGAAGGCATTTGGTCGAAGTTCAAACCTGCTTGTCCATCAGAG
GGTCCACACTGGAGAGAAACCATATAAATGCAGCGAGTGTGGGAAGGGCTTCAGTTACAGCTCAGTGCTT
CAAGTCCATCAGAGGCTGCACACAGGGGAGAAGCCCTACACCTGCAGCGAGTGTGGCAAAGGCTTCTGTG
CCAAGTCTGCACTGCACAAACACCAGCACATTCACCCTGGAGAAAAGCCCTACAGCTGTGGCGAGTGTGG
AAAGGGATTCAGCTGCAGCTCCCACCTCAGCAGTCATCAGAAGACACACACCGGCGAGAGGCCCTACCAG
TGTGACAAGTGTGGCAAAGGTTTCAGTCACAACTCGTACCTTCAAGCTCACCAGAGAGTTCACATGGGGC
AGCATCTGTACAAATGTAACGTGTGTGGTAAGAGTTTCAGTTACAGCTCAGGGCTTCTCATGCATCAGAG
ACTGCACACAGGAGAGAAACCCTACAAATGCGAGTGCGGGAAGAGCTTTGGCCGGAGCTCCGACCTCCAC
ATCCATCAGAGGGTCCACACAGGAGAGAAACCCTATAAATGCAGTGAGTGTGGGAAGGGCTTCCGGCGGA
ATTCAGACCTTCACAGCCACCAGAGGGTCCACACGGGAGAGAGGCCCTACGTGTGTGACGTGTGTGGGAA
GGGTTTCATCTACAGCTCCGACCTCCTTATCCATCAGAGGGTCCACACTGGAGAGAAACCCTATAAATGT
GCTGAGTGTGGCAAAGGCTTCAGTTACAGCTCAGGGCTTCTCATTCACCAGAGAGTCCACACAGGCGAGA
AACCTTACAGATGCCAAGAGTGCGGAAAGGGCTTTAGGTGCACATCAAGCCTTCACAAACATCAGCGAGT
CCACACGGGAAAAAAGCCCTATACGTGTGATCAGTGTGGCAAGGGATTCAGTTATGGCTCTAATCTTCGC
ACCCACCAGAGGTTGCACACAGGAGAGAAACCCTACACTTGTTGTGAATGTGGGAAGGGTTTCAGATATG
GCTCAGGTCTCCTTAGTCATAAGAGAGTGCACACTGGCGAGAAGCCATACAGATGCCACGTGTGTGGGAA
GGGCTATAGTCAGAGCTCACATCTTCAAGGTCATCAGAGGGTCCACACTGGTGAGAAACCCTATAAATGT
GAGGAGTGTGGGAAGGGCTTTGGCCGCAACTCCTGTCTTCATGTTCATCAGAGAGTCCACACTGGAGAGA
AGCCCTATACGTGTGGTGTGTGTGGGAAAGGCTTCAGTTATACCTCAGGTCTGCGGAACCACCAAAGAGT
GCATTTAGGCGAGAACCCTTATAAGTAG

Translation (825 aa):
METLTSRHEKRALHSQASAISQDREEKIMSQEPLSFKDVAVVFTEEELELLDSTQRQLYQDVMQENFRNL
LSVGERNPLGDKNGKDTEYIQDEELRFFSHKELSSCKIWEEVAGELPGSQDCRVNLQGKDFQFSEDAAPH
QGWEGASTPCFPIENFLDSLQGDGLIGLENQQFPAWRAIRPIPIQGSWAKAFVNQLGDVQERCKNLDTED
TVYKCNWDDDSFCWISCHVDHRFPEIDKPCGCNKCRKDCIKNSVLHRINPGENGLKSNEYRNGFRDDADL
PPHPRVPLKEKLCQYDEFSEGLRHSAHLNRHQRVPTGEKSVKSLERGRGVRQNTHIRNHPRAPVGDMPYR
CDVCGKGFRYKSVLLIHQGVHTGRRPYKCEECGKAFGRSSNLLVHQRVHTGEKPYKCSECGKGFSYSSVL
QVHQRLHTGEKPYTCSECGKGFCAKSALHKHQHIHPGEKPYSCGECGKGFSCSSHLSSHQKTHTGERPYQ
CDKCGKGFSHNSYLQAHQRVHMGQHLYKCNVCGKSFSYSSGLLMHQRLHTGEKPYKCECGKSFGRSSDLH
IHQRVHTGEKPYKCSECGKGFRRNSDLHSHQRVHTGERPYVCDVCGKGFIYSSDLLIHQRVHTGEKPYKC
AECGKGFSYSSGLLIHQRVHTGEKPYRCQECGKGFRCTSSLHKHQRVHTGKKPYTCDQCGKGFSYGSNLR
THQRLHTGEKPYTCCECGKGFRYGSGLLSHKRVHTGEKPYRCHVCGKGYSQSSHLQGHQRVHTGEKPYKC
EECGKGFGRNSCLHVHQRVHTGEKPYTCGVCGKGFSYTSGLRNHQRVHLGENPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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