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Report for CCDS42572.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42572.1 Public Homo sapiens 19 TMEM91 24 110 108 CCDS HistoryNCBI Gene:641649Re-query CCDS DB by CCDS ID:42572.1Re-query CCDS DB by GeneID:641649See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42572.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356385.8 ENSP00000348750.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356385.8Link to Ensembl Protein Viewer:ENSP00000348750.4Re-query CCDS DB by Nucleotide ID:ENST00000356385Re-query CCDS DB by Protein ID:ENSP00000348750
Original member Current member NCBI NM_001042595.3 NP_001036060.1 Accepted alive Link to Nucleotide Sequence:NM_001042595.3Link to Protein Sequence:NP_001036060.1Re-query CCDS DB by Nucleotide ID:NM_001042595Re-query CCDS DB by Protein ID:NP_001036060Link to BLAST:NP_001036060.1
Original member Current member NCBI NM_001369862.1 NP_001356791.1 Accepted alive Link to Nucleotide Sequence:NM_001369862.1Link to Protein Sequence:NP_001356791.1Re-query CCDS DB by Nucleotide ID:NM_001369862Re-query CCDS DB by Protein ID:NP_001356791Link to BLAST:NP_001356791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036060.1 139 Q6ZNR0-2 139 100% 0 0
NP_001356791.1 139 Q6ZNR0-2 139 100% 0 0

Chromosomal Locations for CCDS 42572.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 41378310 41378519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41382772 41382921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41383561 41383620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGGACAGCCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCCCTGCCC
AGAAGCCTGGCAGGCATGAGCTGGGGTCCCCCTTAAGAGAGATAGCCTTTGCCGAGTCCCTGAGGGGTTT
GCAGTTCCTGTCACCGCCTCTTCCCTCCGTGAGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTGAG
GACATGTCATCCAGTGACAGTGACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCATTTCTACCCCACG
ACCACCTCGGCTTGGCTGTCTTCTCCATGCTGTGTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTCT
AGCCCAGAAGCATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTGGAATACATGCATGA

Translation (139 aa):
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVE
DMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKHPQCLTYSRCYVSAFGIHA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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