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Report for CCDS42521.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42521.1 Public Homo sapiens 19 NIBAN3 24 110 108 CCDS HistoryNCBI Gene:199786Re-query CCDS DB by CCDS ID:42521.1Re-query CCDS DB by GeneID:199786See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42521.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332386.9 ENSP00000333447.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000332386.9Link to Ensembl Protein Viewer:ENSP00000333447.4Re-query CCDS DB by Nucleotide ID:ENST00000332386Re-query CCDS DB by Protein ID:ENSP00000333447
Original member Current member NCBI NM_001098524.2 NP_001091994.2 Accepted alive Link to Nucleotide Sequence:NM_001098524.2Link to Protein Sequence:NP_001091994.2Re-query CCDS DB by Nucleotide ID:NM_001098524Re-query CCDS DB by Protein ID:NP_001091994Link to BLAST:NP_001091994.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091994.2 651 Q86XR2-3 651 100% 0 0

Chromosomal Locations for CCDS 42521.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17523439 17523459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17527269 17527395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17530755 17530885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17532263 17532388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17533587 17533701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17537376 17537543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17539150 17539265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17539347 17539451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17539603 17539765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17540392 17540582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17542136 17542294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17543317 17543433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17543524 17543631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17546686 17546797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17549444 17549527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17551786 17551898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1956 nt):
ATGGGGCCTGACCGGAAGGAGGTGCCCCTGAGCCGAGGAACGCAGGCGGTGGTCGTGGGGAAGGGAAGAG
GAGCCCCGGGAGACGACAGCAGCATGGGTGGGCGGCCTTCGAGCCCTCTGGACAAGCAGCAGCGGCAGCA
CCTAAGGGGTCAGGTGGACACCCTGCTGAGGAACTTCCTGCCTTGCTACCGTGGGCAGCTGGCAGCGTCT
GTCCTGCGGCAGATCTCTCGAGAGCTGGGCCCTCAGGAGCCGACCGGAAGCCAGTTGCTACGCAGCAAAA
AGCTGCCCCGAGTCCGTGAGCACCGAGGACCCCTGACCCAGCTTCGGGGCCACCCACCCCGGTGGCAGCC
GATCTTCTGTGTTCTGCGTGGGGACGGCCGCCTAGAGTGGTTCAGCCACAAGGAGGAATATGAAAACGGG
GGCCACTGCCTTGGCTCAACAGCCCTGACAGGATACACGCTCCTGACTTCCCAGCGAGAATATCTCCGCC
TTTTGGATGCTCTCTGCCCTGAATCCTTGGGAGACCATACTCAGGAAGAGCCTGACTCCCTCTTGGAAGT
GCCTGTGAGCTTCCCGCTGTTCCTGCAGCACCCCTTCCGCCGGCACCTCTGCTTCTCTGCAGCCACCAGG
GAGGCACAGCATGCCTGGAGGCTGGCCCTGCAGGGTGGCATCCGGCTTCAGGGCATAGTCCTGCAGCGAA
GCCAGGCCCCTGCTGCCCGGGCCTTCCTGGACGCCGTCCGACTCTACCGGCAGCACCAAGGCCACTTTGG
CGACGACGACGTGACCCTAGGCTCAGACGCCGAGGTGCTGACCGCGGTGCTGATGCGGGAGCAACTTCCC
GCGCTGCGAGCCCAGACCCTTCCTGGCCTGCGGGGGGCAGGCCGCGCCCGCGCCTGGGCCTGGACCGAGC
TTCTAGACGCCGTTCACGCAGCTGTCCTGGCCGGGGCCTCCGCCGGGCTCTGCGCCTTCCAGCCCGAAAA
GGACGAGCTGCTTGCGTCGCTGGAGAAGACGATCCGCCCGGACGTGGACCAGCTGCTGCGGCAGCGGGCG
CGTGTGGCGGGGCGGCTGAGGACGGATATCAGGGGACCGCTCGAGTCGTGCCTGCGCCGGGAGGTGGACC
CGCAGCTGCCCCGGGTCGTGCAGACCCTGCTGCGCACCGTGGAAGCCTCGCTCGAGGCGGTGCGGACCCT
CCTGGCTCAAGGCATGGACCGACTGTCCCACCGCCTGCGCCAGAGCCCCTCAGGCACGCGGCTGCGCAGG
GAGGTTTACTCATTTGGGGAGATGCCGTGGGACTTGGCGCTGATGCAGACATGCTACCGTGAGGCCGAGC
GGAGCCGGGGGCGCTTGGGGCAGCTGGCAGCACCGTTTGGCTTTCTGGGGATGCAGAGCCTCGTGTTTGG
GGCCCAAGATCTTGCACAGCAGCTCATGGCTGACGCCGTGGCCACCTTCCTGCAGCTGGCTGACCAGTGT
CTGACGACGGCCCTCAACTGTGACCAGGCTGCCCAGAGGCTGGAGAGAGTCAGGGGGCGCGTGCTGAAGA
AATTCAAATCGGACAGCGGGTTGGCGCAGAGGAGGTTCATCCGAGGCTGGGGTCTCTGCATCTTTTTACC
TTTTGTGCTGAGCCAACTCGAGCCAGGCTGCAAAAAGGAGCTGCCTGAGTTCGAGGGGGATGTCCTTGCC
GTGGGCAGCCAGGCTCTGACCACTGAGGGCATCTATGAGGACGTCATCCGGGGGTGCTTGCTGCAGAGGA
TTGACCAAGAATTGAAAAAGACCCTTGGTGCCAATGATGTATCCTGCACTCTGGACGGCTGCTTGGAGGT
CCCATGGGAACAGGAGGGAGCAGATGAGGAAACTGAGGCTGAGCGGGAAGGAGGGGCTTGTCCCAGGCAG
CCAGACTCTGGTGCCCAGATCCAGCCACTCTGCCCACCGCCTTCTCCAGGAACATTCCGGAGCTGA

Translation (651 aa):
MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFLPCYRGQLAAS
VLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENG
GHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAATR
EAQHAWRLALQGGIRLQGIVLQRSQAPAARAFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLP
ALRAQTLPGLRGAGRARAWAWTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRA
RVAGRLRTDIRGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR
EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAVATFLQLADQC
LTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVLSQLEPGCKKELPEFEGDVLA
VGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCTLDGCLEVPWEQEGADEETEAEREGGACPRQ
PDSGAQIQPLCPPPSPGTFRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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