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Report for CCDS41751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41751.1 Public Homo sapiens 12 CLEC1B 24 110 108 CCDS HistoryNCBI Gene:51266Re-query CCDS DB by CCDS ID:41751.1Re-query CCDS DB by GeneID:51266See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348658.4 ENSP00000327169.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000348658.4Link to Ensembl Protein Viewer:ENSP00000327169.6Re-query CCDS DB by Nucleotide ID:ENST00000348658Re-query CCDS DB by Protein ID:ENSP00000327169
Original member Current member EBI ENST00000428126.6 ENSP00000406338.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428126.6Link to Ensembl Protein Viewer:ENSP00000406338.2Re-query CCDS DB by Nucleotide ID:ENST00000428126Re-query CCDS DB by Protein ID:ENSP00000406338
Original member Current member NCBI NM_001099431.2 NP_001092901.1 Accepted alive Link to Nucleotide Sequence:NM_001099431.2Link to Protein Sequence:NP_001092901.1Re-query CCDS DB by Nucleotide ID:NM_001099431Re-query CCDS DB by Protein ID:NP_001092901Link to BLAST:NP_001092901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092901.1 196 Q9P126-2 196 100% 0 0

Chromosomal Locations for CCDS 41751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 9993143 9993287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9995140 9995246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9996846 9997000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9997160 9997279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9999037 9999100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGCAGGATGAAGATGGATACATCACCTTAAATATTAAAACTCGGAAACCAGCTCTCATCTCCGCTGTCA
TGCAGCGCAATTACCTACAAGGTGAGAATGAAAATCGCACAGGAACTCTGCAACAATTAGCAAAGCGCTT
CTGTCAATATGTGGTAAAACAATCAGAACTAAAGGGCACTTTCAAAGGTCATAAATGCAGCCCCTGTGAC
ACAAACTGGAGATATTATGGAGATAGCTGCTATGGGTTCTTCAGGCACAACTTAACATGGGAAGAGAGTA
AGCAGTACTGCACTGACATGAATGCTACTCTCCTGAAGATTGACAACCGGAACATTGTGGAGTACATCAA
AGCCAGGACTCATTTAATTCGTTGGGTCGGATTATCTCGCCAGAAGTCGAATGAGGTCTGGAAGTGGGAG
GATGGCTCGGTTATCTCAGAAAATATGTTTGAGTTTTTGGAAGATGGAAAAGGAAATATGAATTGTGCTT
ATTTTCATAATGGGAAAATGCACCCTACCTTCTGTGAGAACAAACATTATTTAATGTGTGAGAGGAAGGC
TGGCATGACCAAGGTGGACCAACTACCTTAA

Translation (196 aa):
MQDEDGYITLNIKTRKPALISAVMQRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCD
TNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTHLIRWVGLSRQKSNEVWKWE
DGSVISENMFEFLEDGKGNMNCAYFHNGKMHPTFCENKHYLMCERKAGMTKVDQLP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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