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Report for CCDS41582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41582.1 Public Homo sapiens 11 BET1L 24 110 108 CCDS HistoryNCBI Gene:51272Re-query CCDS DB by CCDS ID:41582.1Re-query CCDS DB by GeneID:51272See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382762.8 ENSP00000372210.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382762.8Link to Ensembl Protein Viewer:ENSP00000372210.3Re-query CCDS DB by Nucleotide ID:ENST00000382762Re-query CCDS DB by Protein ID:ENSP00000372210
Original member Current member NCBI NM_001098787.2 NP_001092257.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098787.2Link to Protein Sequence:NP_001092257.1Re-query CCDS DB by Nucleotide ID:NM_001098787Re-query CCDS DB by Protein ID:NP_001092257Link to BLAST:NP_001092257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092257.1 111 Q9NYM9 111 100% 0 0

Chromosomal Locations for CCDS 41582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 205302 205469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 205611 205667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 205952 206043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 207303 207321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (336 nt):
ATGGCGGACTGGGCTCGGGCTCAGAGCCCGGGCGCTGTGGAAGAGATTCTAGACCGGGAGAACAAGCGAA
TGGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGA
GGATCAGAACCGGTACCTGGATGGCATGGACTCGGATTTCACAAGCATGACCAGCCTGCTTACAGGGAGC
GTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGG
GTCTAATTGTGGCCTTCTTCATCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGA

Translation (111 aa):
MADWARAQSPGAVEEILDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRYLDGMDSDFTSMTSLLTGS
VKRFSTMARSGQDNRKLLCGMAVGLIVAFFILSYFLSRART


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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