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Report for CCDS41442.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41442.1 Public Homo sapiens 1 KIAA1614 24 110 108 CCDS HistoryNCBI Gene:57710Re-query CCDS DB by CCDS ID:41442.1Re-query CCDS DB by GeneID:57710See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41442.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367588.9 ENSP00000356560.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367588.9Link to Ensembl Protein Viewer:ENSP00000356560.4Re-query CCDS DB by Nucleotide ID:ENST00000367588Re-query CCDS DB by Protein ID:ENSP00000356560
Original member Current member NCBI NM_020950.2 NP_066001.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020950.2Link to Protein Sequence:NP_066001.1Re-query CCDS DB by Nucleotide ID:NM_020950Re-query CCDS DB by Protein ID:NP_066001Link to BLAST:NP_066001.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066001.1 1190 Q5VZ46-1 1190 100% 0 0

Chromosomal Locations for CCDS 41442.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 180913244 180913293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180916154 180917100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180917851 180917914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180928430 180928573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180935115 180936670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180938555 180938711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180941045 180941285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180944389 180944516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180945303 180945588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3573 nt):
ATGGAGGGGACAGAGGCGGCGGCGGCCAAACCCGCGGGCGGCAGCCCCCAAGGGCCCAAGACAGGGAGTG
GAACAGCCAGCCCCGTGGAGGGGACCTCAGCTGTGGAGTGGAGTGGTCCTGAGCCACAGCTGGATAACGG
ACACCCCCCAAGACCCTGGCCTTGCCCTCAGGAAAACAGAACATCCAGCCTGATGGCCCCCCAGCCTCCC
AGGGTATGGGGAGTACAGCTCCAGGGCCCCTCTGTGCTGGAATCCAAGGTGAGGGCTTTGAAGGAGAAGA
TGACAGTGGCCAAACAGGGAGTGAGTCCCTGCTCTGCTTCCCAAGAGTGGTCATCCCCCAAGAAACCCCA
ATGCAGACGAGGCAAGGCAGGGAGAGCCGGGACTCCATCAGAGGGGTCTTTCCTGCCAGGTGCTGTGGTG
GCTCCTCGTACCCAAAACCTGCCTGATGGGCAGCTGGACGGCAGCATCAATGAGGAGCAACCCGCCAGGG
ATGGAGGCCCCAGGCTTCCCAGGCCGCCTGCCCCTGGACGTGAGTACTGCAACAGGGGGAGCCCGTGGCC
TCCAGAAGCCGAATGGACACTTCCTGACCATGACAGAGGTCCGCTGCTGGGGCCCAGCTCTTTGCAACAG
AGCCCGATCCATGGAGTTACTCCCGGACGGCCTGGGGGTCCTGGTCATTGTAACAAAATCATCCACATTC
CCAGCCCAAGGACAGGAAGGTCCTACCCTTTTCCAGATGGCGTGGTGACAGAGGCAGATCTGGATAGCAC
ATCCCTGACCTCCGAGGAGGTCTTTGTCCCCAGGACGGCCCTGCTGGGTGAGCGCTGGAGAGCTGGAGAC
CTGGAGGCTCTGGGCGCTGGGAGCAGTGTCTTGTCCCTGTCTGATCGGGTGGAGAGAAACCGCCTGTTGC
TGCAGGAGATGCTCAACGTTTCTGGGCAGAGCCCCCGCAAGGTGGGAACCCCTGCCTGGACTCCATCCTG
GGACACAGCTGCACCAGAGCGACCAGTGGGGGATGTGGACTGGGCCTCGGGCACCTCCTTGCAGGACTCC
GGCCAGAACAGGACCGTTGGTCCCAACCCGGAGCCTGTGCTGAGCCCCAGGCATGAGGAAGCCACGCATC
TGCTGCAGCGTGCCCGCATGAAGGCCAGGACCCGGCCCCTCCGTGCCAGCCATGACATCGTGCCCACCAT
TACCCAGGGCAGCCGAGATGGCCACAGAAGCCCAGCCCGGGACCCCAGGACGACCCCTGCCTGCAGAGAC
AGCCTCCAGAACGGGCACACGAGCGATTCCTCCAGCGGAGAGTCCAGCGGTGGGCACAGGCCGAGGCGGG
GCCCCTCGCCGTCGCACGTGCGCTTTGAGGATGAGTCCGCCCGCGAAGCCGAGTTCCGTCACCTGGAGCG
GCTGCAGCAGCGCCAGCGCCAGGTGCTGAGCACCGTGTTGCAGGCCGCGGACCAGGGCCCCCTGCGCTCC
AAGCCCGACCTCGCCGACTACATCAACGGGGCTCCCCGGCTCCGGGACGCGGGGCAGGGGACATTCCACA
GGCTTGTGGGCAGCCTGGACCGCAGGGGACACCCGGCACCGCCGGCACCGGGCAGCGAGAGGAGGTGCCA
GGCCTGCGGCAGCTGCATCGACGACCCGCGCCCCGCCCAGGGGAAGGCGCCCCCCGTCCCCAGGACCCTC
CAGGAGCTCCAGGCTGCCTGTGGGATGGAGAGGGTGCTGGGTGGCCTGAGCTCCCCACTCCGGCTCCTTC
CTGCAGAGCCCCGGCTCCACATGGAATGGATCCGGGAAACACACATCGGAGACACCGTGTGCCCTGCGGA
GGTGGACTCTGCCCTGGACAGCACAGACAACTCTGACAACTGCAGGACCGACAGTGAGGAGGCGGGGACC
TCTCAGGCTGGCTGGGCGTGTGGGCGGACCCAAGGCAGCAGCCCGCGACTGCGACTGCGGGGCTCCAGGC
CTCGAGGCCACAGGTGGTCCAAGAAGGCTGAGGCGGAGCTCCCTTGGGGCCTTCAGGCCCAGCAACACCT
GCCTAGGGCTGATGATGTGGAGGTGGAAAATGAGGTGAAAGAGGGCAGAGGACACACGCCTGAAGGAACT
CTATTTTTGAGAGAAGATGCCAAGCCTCCTGACCTGGAGTTGAAGCGGGTGTCCCTGGGACCCCAGTGGC
AGCCTGGACCAGGGCTGGGAAGTCACCAGCCTCACCCTTTGGATTCCCGGACTCCATGCAGGACAGCCTA
TGCCACCACCGCCCCCATGACGCCTGAATCATCGGGGCCAGGAGGCCAGGCCCAGGTTACAGAAAGCCAC
GAGTCCCTGGAAATTGTCTCTCCTTCCTCCCTGCAACAGAGCCATGCAGAGCCTTCTGCCCCACACCAAG
CCTGGCAGCCAACAGCTTCCTTGTGTCCTGAAGGCTGGGCGCCAACCCCTCCCCCTTCGAGGAAAACCAC
CTCGCCAGTGTCTCACAGGAAGGCAGCCCTGGCTGGACTGCTCAGGCTGGGTGACCAGACAGAGCCTGTG
GGTATCCCTCGGCCTCCTTCAAGAAGCGCGGTTCTCAGGACCTGTGAGCTGCCCCCATCACAGACCCAGC
CCAGCCGCCCTCAGGTCAGGCACCCACTGCTGGCCCTGTCCACCAACAACTGCAACAACAGCGCACCTCG
GGGGCTGCAGGAGCCCTACGGGGGAGCCGTCCACGAGGGTAGGGTGGAGAGGGGCCCCTGCAGCCGGGAA
CCGGAGCCGCCCCTGGAGAACAGCAGAGATGGAGGACCCCAGGGCTTTCTTGGCTCAGCAGATGTTGCCA
CCATCAACTCCACGGGCATCACCCTCTCCCTGTCCTCAGAGGAGTCAGAGTCCAGCAAGGAATCAGAGGG
AAGCCTGCAGAGGACAGGGTCAGGATCTGGAGGACATGTGCTGTCAAGAGCATCAGCAGGAGCTGGCACA
GGACCCGGCTCCCCCTCGGCTGCCCCTTTGGACCAGAACAAGAAAAGGAGCAGCAGCATAGCCTCCACCC
TGGGGCTGAAAAAGCTCTTCTCAGCCCTGGGCCAGAGTTCCCGGCCCAAGCTGGGCAAGTCCCGCAGCTA
CAGTGTGGAGCAGTTGCAGCCCGCCCCGCCTGGCCTGACGTCACAGTCCAGGGCCCCATCGTTACAATCC
CTGCACCCGGTGTCACCCTCTCACCAGCGTCGGAAAGCTGCCTCTTTTCAGAACCTCCATTCTCTGCTGA
GCAGCAAGGGGAACCGGTCCAGCCTCTACCTGGTAGCAGGGCCAGGGGACCACAGTGCAGCTGGCAGGCC
GGCCAAGACTTCACCACGGCGTGCCCTCAGTGTGGAGGACGTGGGTGCTCCCAGCCTGGCTCGCACCGTG
GGCCGCCTGGTGGAGGTGTTCCCAGACGGCACCAGCCAGCTGCAGCTGCAGCGCTCCCCAGGGGGCACTT
TCGGCTTCTGCGTGGCCTCTGGGAATGGGCGCCCAGACTCAGGTATGCCCTCTCCTCTTCCTCAGCCCCA
TGGCTGGGGCGGCCTTAGCAAACAAGGCAGGGCCTTCTGGCTGTGGTCAGAGGCTTTTCTGGTCTTTGGC
TGA

Translation (1190 aa):
MEGTEAAAAKPAGGSPQGPKTGSGTASPVEGTSAVEWSGPEPQLDNGHPPRPWPCPQENRTSSLMAPQPP
RVWGVQLQGPSVLESKVRALKEKMTVAKQGVSPCSASQEWSSPKKPQCRRGKAGRAGTPSEGSFLPGAVV
APRTQNLPDGQLDGSINEEQPARDGGPRLPRPPAPGREYCNRGSPWPPEAEWTLPDHDRGPLLGPSSLQQ
SPIHGVTPGRPGGPGHCNKIIHIPSPRTGRSYPFPDGVVTEADLDSTSLTSEEVFVPRTALLGERWRAGD
LEALGAGSSVLSLSDRVERNRLLLQEMLNVSGQSPRKVGTPAWTPSWDTAAPERPVGDVDWASGTSLQDS
GQNRTVGPNPEPVLSPRHEEATHLLQRARMKARTRPLRASHDIVPTITQGSRDGHRSPARDPRTTPACRD
SLQNGHTSDSSSGESSGGHRPRRGPSPSHVRFEDESAREAEFRHLERLQQRQRQVLSTVLQAADQGPLRS
KPDLADYINGAPRLRDAGQGTFHRLVGSLDRRGHPAPPAPGSERRCQACGSCIDDPRPAQGKAPPVPRTL
QELQAACGMERVLGGLSSPLRLLPAEPRLHMEWIRETHIGDTVCPAEVDSALDSTDNSDNCRTDSEEAGT
SQAGWACGRTQGSSPRLRLRGSRPRGHRWSKKAEAELPWGLQAQQHLPRADDVEVENEVKEGRGHTPEGT
LFLREDAKPPDLELKRVSLGPQWQPGPGLGSHQPHPLDSRTPCRTAYATTAPMTPESSGPGGQAQVTESH
ESLEIVSPSSLQQSHAEPSAPHQAWQPTASLCPEGWAPTPPPSRKTTSPVSHRKAALAGLLRLGDQTEPV
GIPRPPSRSAVLRTCELPPSQTQPSRPQVRHPLLALSTNNCNNSAPRGLQEPYGGAVHEGRVERGPCSRE
PEPPLENSRDGGPQGFLGSADVATINSTGITLSLSSEESESSKESEGSLQRTGSGSGGHVLSRASAGAGT
GPGSPSAAPLDQNKKRSSSIASTLGLKKLFSALGQSSRPKLGKSRSYSVEQLQPAPPGLTSQSRAPSLQS
LHPVSPSHQRRKAASFQNLHSLLSSKGNRSSLYLVAGPGDHSAAGRPAKTSPRRALSVEDVGAPSLARTV
GRLVEVFPDGTSQLQLQRSPGGTFGFCVASGNGRPDSGMPSPLPQPHGWGGLSKQGRAFWLWSEAFLVFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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