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Report for CCDS40680.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40680.1 Public Mus musculus 9 Myo1e 23 108 98 CCDS HistoryNCBI Gene:71602Re-query CCDS DB by CCDS ID:40680.1Re-query CCDS DB by GeneID:71602See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40680.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034745.8 ENSMUSP00000034745.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034745.8Link to Ensembl Protein Viewer:ENSMUSP00000034745.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034745Re-query CCDS DB by Protein ID:ENSMUSP00000034745
Original member Current member NCBI NM_181072.3 NP_851417.2 Accepted alive Link to Nucleotide Sequence:NM_181072.3Link to Protein Sequence:NP_851417.2Re-query CCDS DB by Nucleotide ID:NM_181072Re-query CCDS DB by Protein ID:NP_851417Link to BLAST:NP_851417.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_851417.2 1107 E9Q634 1107 100% 0 0

Chromosomal Locations for CCDS 40680.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 70207701 70207703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70286912 70287055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70297267 70297356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70301693 70301787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70316592 70316679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70320069 70320158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70322392 70322523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70324833 70324967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70327144 70327276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70335115 70335311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70337729 70337809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70338717 70338803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70341281 70341367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70341982 70342149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70343044 70343129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70346687 70346768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70353260 70353366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70359285 70359383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70362223 70362367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70367616 70367730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70368669 70368838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70370357 70370502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70376504 70376650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70378211 70378368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70378721 70378810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70383804 70384005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70395776 70395945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70398722 70398798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3324 nt):
ATGGGCAGCAAAGGCGCCTACCGGTACCATTGGCAGAGCCACAATGTCAAGCACAGTGGTGTGGACGACA
TGGTTCTACTGTCCAAGATCACAGAGAGCTCCATTGTAGAGAACCTGAAGAAGAGATACATGGACGACTA
TATTTTTACATATATAGGGTCTGTATTAATCTCTGTCAACCCATTCAAGCAAATGCCATATTTTGGAGAA
AAAGAAGTCGAAATGTACCAAGGAGCGGCACAGTATGAGAACCCGCCTCATATCTATGCCCTTGCTGATA
GTATGTACAGAAACATGATCATCGACAGAGAGAACCAGTGTGTCATCATCAGCGGTGAAAGTGGTGCTGG
AAAGACAGTGGCTGCCAAGTACATTATGAGCTATGTCTCCAGAGTGTCTGGAGGAGGCCCCAAGGTCCAG
CATGTGAAGGACATCATCCTTCAATCCAACCCGCTCCTGGAGGCCTTCGGAAACGCCAAGACAGTGCGCA
ACAACAACTCCAGCCGATTTGGAAAATACTTTGAAATCCAGTTCAGTCCAGGTGGGGAACCAGATGGTGG
CAAGATCTCCAACTTCCTTCTGGAAAAGTCCAGAGTGGTGATGCGGAACCCGGGGGAACGGAGCTTCCAC
ATATTCTACCAGCTCATTGAGGGTGCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCACCAGCATGGACT
ACTATTACTACCTGAGCCTCTCGGGGTCCTACAAGGTGGATGACATTGATGACAAGCGGGATTTCCAGGA
AACCCTGCACGCCATGAATGTGATTGGAATCTTCTCGGAAGAGCAGACTCTCGTGTTGCAGATTGTGGCT
GGAATTCTCCACTTGGGAAACATCAGCTTCAAAGAAGTGGGCAACTATGCCGCCGTGGAGAGTGAAGAAT
TTTTGGCTTTTCCTGCGTATCTGCTGGGTATAAACCAAGACCGGTTAAAAGAGAAGCTAACGAGCCGCCA
GATGGACAGTAAGTGGGGAGGAAAGTCAGAGTCCATCCATGTGACCCTCAACGTGGAGCAGGCCTGCTAC
ACCAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGATTCTATCAATAAAG
CCATGGAGAAGGACCACGAGGAGTACAACATTGGAGTCCTGGACATCTATGGCTTTGAAATATTTCAGAA
AAATGGCTTTGAGCAGTTCTGCATCAATTTCGTTAACGAAAAATTACAGCAGATTTTTATTGAGCTGACG
CTAAAAGCAGAGCAGGAAGAATACGTTCAGGAGGGAATAAGATGGACACCCATTGAATATTTCAATAATA
AAATCGTGTGTGACCTCATAGAGAGCAAAGTCAACCCTCCTGGGATTATGAGCATCCTGGATGACGTGTG
CGCCACCATGCATGCTGTGGGTGAGGGGGCTGACCAGACTCTGCTACAGAAGCTCCAGATGCAGATCGGG
AGCCATGAGCACTTCAACAGCTGGAACCAAGGCTTCATCATTCACCACTACGCTGGGAAGGTTTCCTATG
ACATGGACGGCTTCTGCGAAAGGAACCGGGATGTGCTTTTCATGGACCTGATTGAACTCATGCAGAGCAG
TGAGCTGCCTTTTATAAAGTCTTTATTTCCTGAAAACCTGCAAGCTGACAAGAAAGGGCGCCCAACGACC
GCAGGAAGCAAAATAAAGAAACAAGCCAACGACCTGGTGAGCACCCTGATGAAATGCACACCCCACTACA
TTCGCTGCATAAAACCAAACGAAACCAAGAAGCCTAAAGACTGGGAGGAGAGCAGAGTGAAGCATCAAGT
GGAGTACCTGGGTCTCAAAGAAAACATCCGAGTGAGAAGAGCTGGTTATGCTTATCGGCGTGTCTTCCAG
AAGTTTCTACAGAGGTATGCCATTCTGACCAAAGCTACCTGGCCTGTGTGGAGAGGAGATGAGAAACAAG
GTGTCCTCCATCTACTGCAGTCTGTCAACATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTAAAGTGTT
CATCAAAGCCCCAGAGTCTCTGTTTCTTCTAGAAGAGATGAGAGAGAGAAAGTACGATGGTTACGCACGT
GTGATACAGAAAACATGGAGGAAGTTCGTGGCCCGCAAGAAATATGTTCAAATGAGAGAAGAAGCCTCAG
ACCTGCTGTTGAACAAGAAGGAGAGGAGGAGAAACAGCATCAACCGAAACTTCATCGGGGACTACATCGG
GATGGAGGAGCGCCCGGAACTGCAGCAGTTTGTAGGCAAGAGGGAGAAGATTGACTTTGCTGACACAGTC
ACCAAGTACGACAGGAGGTTCAAGGGTGTCAAGCGAGACCTGCTGCTAACCCCCAAGTGCTTGTACTTAA
TTGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGGTGTTGTGAAGGAAGTCCTGAAGCGGAGGATCGA
GGTGGAAAGGATCCTGTCCGTGTCCCTCAGTACCATGCAGGATGACATCTTCATTCTCCACGAGCAAGAA
TATGACAGTTTGCTGGAGTCCGTCTTTAAAACGGAGTTCCTGAGCCTCTTAGCAAAGCGATACGAGGAAA
AAACCCAGAAGCAACTACCTCTGAAATTCAGCAATACCCTTGAACTGAAGTTGAAAAAGGAGAACTGGGG
TCCCTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAG
CCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTACCAGAAGAA
ACACCGTCACCAGCAGAGGGTATCCAGGTGGAACTAAGAACAATTACCCGATGAGAGCTGCCCCTGCTCC
CCCAGGATGCCATCAAAACGGAGTCATACGAAACCAGTTTGTGCCTCCTCCCCATGCCTTTGGAAACCAG
AGGTCCAATCAGAAAAGCCTGTACACCTCTATGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACCGGCT
CGGATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGAGT
CCGAAGACAAACGAGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCT
CAGGTGCCACAGTGCAAGGCCTTGTATGCCTATGATGCTCAGGACACGGACGAACTCAGCTTCAACGCCA
ACGATATTATTGATATTATTAAAGAAGACCCTTCTGGCTGGTGGACGGGTAGACTACGAGGCAAGCAGGG
CCTGTTTCCTAACAACTACGTCACCAAGATCTGA

Translation (1107 aa):
MGSKGAYRYHWQSHNVKHSGVDDMVLLSKITESSIVENLKKRYMDDYIFTYIGSVLISVNPFKQMPYFGE
KEVEMYQGAAQYENPPHIYALADSMYRNMIIDRENQCVIISGESGAGKTVAAKYIMSYVSRVSGGGPKVQ
HVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSPGGEPDGGKISNFLLEKSRVVMRNPGERSFH
IFYQLIEGASPEQKQSLGITSMDYYYYLSLSGSYKVDDIDDKRDFQETLHAMNVIGIFSEEQTLVLQIVA
GILHLGNISFKEVGNYAAVESEEFLAFPAYLLGINQDRLKEKLTSRQMDSKWGGKSESIHVTLNVEQACY
TRDALAKALHARVFDFLVDSINKAMEKDHEEYNIGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELT
LKAEQEEYVQEGIRWTPIEYFNNKIVCDLIESKVNPPGIMSILDDVCATMHAVGEGADQTLLQKLQMQIG
SHEHFNSWNQGFIIHHYAGKVSYDMDGFCERNRDVLFMDLIELMQSSELPFIKSLFPENLQADKKGRPTT
AGSKIKKQANDLVSTLMKCTPHYIRCIKPNETKKPKDWEESRVKHQVEYLGLKENIRVRRAGYAYRRVFQ
KFLQRYAILTKATWPVWRGDEKQGVLHLLQSVNMDSDQFQLGRSKVFIKAPESLFLLEEMRERKYDGYAR
VIQKTWRKFVARKKYVQMREEASDLLLNKKERRRNSINRNFIGDYIGMEERPELQQFVGKREKIDFADTV
TKYDRRFKGVKRDLLLTPKCLYLIGREKVKQGPDKGVVKEVLKRRIEVERILSVSLSTMQDDIFILHEQE
YDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLELKLKKENWGPWSAGGSRQVQFHQGFGDLAILK
PSNKVLQVSIGPGLPKNSRPTRRNTVTSRGYPGGTKNNYPMRAAPAPPGCHQNGVIRNQFVPPPHAFGNQ
RSNQKSLYTSMARPPLPRQQSTGSDRLSQTPESLDFLKVPDQGVAGVRRQTSSRPPPAGGRPKPQPKPKP
QVPQCKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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