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Report for CCDS37934.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37934.1 Public Mus musculus 19 Cemip2 23 108 98 CCDS HistoryNCBI Gene:83921Re-query CCDS DB by CCDS ID:37934.1Re-query CCDS DB by GeneID:83921See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37934.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025663.7 ENSMUSP00000025663.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025663.7Link to Ensembl Protein Viewer:ENSMUSP00000025663.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000025663Re-query CCDS DB by Protein ID:ENSMUSP00000025663
Original member Current member EBI ENSMUST00000096194.8 ENSMUSP00000093908.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096194.8Link to Ensembl Protein Viewer:ENSMUSP00000093908.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000096194Re-query CCDS DB by Protein ID:ENSMUSP00000093908
Original member Current member NCBI NM_001033759.2 NP_001028931.1 Accepted alive Link to Nucleotide Sequence:NM_001033759.2Link to Protein Sequence:NP_001028931.1Re-query CCDS DB by Nucleotide ID:NM_001033759Re-query CCDS DB by Protein ID:NP_001028931Link to BLAST:NP_001028931.1
Original member Current member NCBI NM_031997.4 NP_114386.3 Accepted alive Link to Nucleotide Sequence:NM_031997.4Link to Protein Sequence:NP_114386.3Re-query CCDS DB by Nucleotide ID:NM_031997Re-query CCDS DB by Protein ID:NP_114386Link to BLAST:NP_114386.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028931.1 1383 Q5FWI3 1383 100% 0 0
NP_114386.3 1383 Q5FWI3 1383 100% 0 0

Chromosomal Locations for CCDS 37934.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21792650 21792980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21797327 21797467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21797867 21798428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21801862 21802031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21807359 21807547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21809269 21809438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21811767 21811976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21812211 21812416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21812551 21812620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21815431 21815559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21817923 21818011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21823788 21823919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21825090 21825125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21826040 21826195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21829800 21829977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21832027 21832242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21835418 21835626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21842041 21842223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21844620 21844839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21847937 21848035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21852225 21852379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21855659 21855762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21856155 21856351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4152 nt):
ATGTATGCCGCTGGTTCCAGGGGCCACTCCCCTGCTTTCCTGCAACCTCAAAACGGAAACGGCCACCGCT
CACCTGGTTATGTTCCCGGGAAGGTGGTTCCCTTACGTCCCGCGCCTCCTCCAAAGAACCACGCCTCCGC
CAAACTGACCTCCAGGAGCCAAGACGCCCCAGCGACCTTTGCTTTCTCCCCCGAGGAGCAGCGGACTCCG
AGCGAGAGCCGAAAGCGGAAGAGGCACAAGAACACCTTCATCTGCTTCGCCATAACCAGCTTCTCGTTCT
TTGTGGCGCTTGCGGTCATTTTGGGAATATCCTCAAAATACGCTCCAGATGAGAATTGTCCAGATCAAAA
CCCTCGTCTCAGGAACTGGGATCCAGGACAAGATTCTGCGAAGCACATTGTTATCAAGGAGGGGGATTTG
TTCCGCCTGACCTCAGATGCAACAGTGGACTCTATAGTCATTCAGGATGGAGGACTGCTTGTGTTTGGGG
ATGATAAAGATGGATCCAAGAATATAACTTTGAGGACTCGATACATCCTGATCCAGGATGGTGGGGCGCT
TCATATTGGAGCAGAAAAATGCCGCTATAGATCCAAAGCGACAATTACCTTGTATGGCAAGTCAGATGAA
CGTGAAAGTATGCCAATATTTGGCAAGAAGTTTATTGGCGTGGAGGCTGGCGGGACACTGGAGTTACACG
GGGCACAGAGGACATCATGGACGATGCTGGCGAGGACTCTGCATTCTTCAGGCTTGCCCTTTGGGTCTTA
TGCCTTCGAGAAGGACTTTTCCCGGGGCCTTAATGTGAGGGTCATTGATCAAGACACAGCCAGAGTTTTA
GAAAACGAGAAGTTCGATACCCACGAGTACCACAATGAGAGCAGGAGGCTGCAGGAGTTTTTGAGAGCTC
AGGAGCCCGGCCGGATTGTGGCTATTGCTGTTGGAGACTCAGCAGTCAAGAGCCTGTTACAGGGAACAAT
CCAGATGATCCAGGATCGGTTGGGGAGTAAACTGATCCAAGGTCTGGGCTACAGGCAAGCTTGGGCCTTA
GTTGGTGTCATCGATGGTGGAAGTTCTTCCTGCAATGAATCTGTGAGAAACTATGAAAACCATAGCACTG
GGGGGAAGGCCCTGGCTCAAGGAGAATTCTACACCCTGGACGGTCAGAAGTTCTCTGTGACAGCCTACAG
TGAATGGAGTCAAGGAATCTCCCTCTCAGGCTTCCGGGTGGACATTGCGGATGGAGTGAAGCTTCACCTG
TTGGACGACGTCAGCACTTGGGAAGCTGGAGACCGAATTGTGGTGGCCAGCACCGACTATTCCATGTACC
AAGCAGAGGAGCTAACTCTTCTCCGCTGCCCCGAGTGCAGCCGTTCTCAGGTCAAAGTCAAAGAGATCCC
CCAGTACCTGCACGTCGGTGAGATCATAGACGGGATAGACATGAGAGCTGAGGTTGGACTTCTCACCCGC
AACATTGTGATCCAAGGAGAGATGGAGGATTCATGCTATGCAGAAAATCACTGCCAGTTCTTCGATTATG
ACACCTTTGGGGGACACGTCATGATAGAGAAGAATTTTACTTCAGTCCATCTTTCTTATGTGGAATTGAA
ACACATGGGCCAGCAGCATATGGGCCGGTATCCTGTGCATTTTCACCTGTGTGGAGATGTAGATTCTAAA
GGAGGGTACAGCCAGCCAGCGTCTGTGGATGGCCTGTCTGTTCATCACAGCTTTTCAAGGTGCATCACCG
TGCACGGGACCAGTGGCTTGCTAATCAAAGACACCATTGGCTTCGACACACTAGGTCATTGCTTCTTTTT
GGAAGATGGTGTTGAACAGCGAAATATTTTGTATCATAACTTGGGGCTTCTTACCAAGCCGGGCACTCTC
CTCCCAACGGACAGGAACAGCTCCATGTGCACCGTCATGCGTGATGGAGTGTTTGGAAACTACGTCCCTG
TGCCTACCACAGACTGCATGGCTGTTTCAACTTTCTGGATTGCCCACCCCAACAACCACCTGATCAATAA
CGCAGCTGCAGGCTCACAGGATGCTGGAATATGGTATTTATTCCACAAGGAACCAACTGGGGAGTCCAGT
GGGCTGCAGCTCCTGGAGAAGCCAGAACTCACTCCGCTGGGGATATTTTATAACAACAGGGTTCATTCAA
ATTTTAAGGCTGGTTTATTTGTGGACAAAGGTGTCAAAACGACCAACGCCAGTGCATCTGACCCAAGGGA
GTACCTCTGCCTGGATAACAGTGCAAGGTTTCGGCCCCATCAGGATGCAGACCCTGAGAAGCCACGCGTT
GCAGCCATCATCGACAGGCTCATTGCTTTTAAGAACAATGACAACGGAGCCTGGGTCAGAGGAGGAGATA
TTATTGTTCAGAATTCAGCATTTGCAGATAACGGAAAGGGGCTGACCTTTGCCAGTGATGGGAGCTTCCC
AAGCGATGAAGGGTCCAGTCAGGAGGTGACAGAGTCCCTCTTTGTCGGGGAGAGTAGGAATTACGGCTTT
CAAGGTGGCCAAAACAAGTACATGGGCACAGGGGGAATCGATCAGAAGCCTCGGACGCTACCCAGGAACA
GGACATTCCCAATCCGAGGCTTTCAGATTTACGATGGGCCTATTCATCTCACAAAGAGTACTTTCAAAAA
GTATGTGCCAACTCCAGACAGGTACAGCAGTGCAATTGGCTTCCTCATGAAGAATTCCTGGCAGACAACA
CCCAGGAATAACGTTTCCCTTGTGAAGTTTGGTCCACAGGTCTCTCTGAACGTCTTCTTTGGAAAGCCTG
GCCCCTGGTTTGAGGATTGTGAGCTGGACGGCGATAAGAACTCCATCTTCCATGACATTGATGGCTCTGT
GACAGGATACAAGGACACCTATGTGGGAAGGATGGACAACTACCTGATCCGCCATCCAAACTGTGTCAAT
GTTACTAAGTGGAATGCAGTGATCTGTAGCGGGACCTACGCCCAGGTGTATGTTCAGACCTGGAACACTC
CGAATCTTAGCATGATCATCACACGGGATGAATACCCATCCCACCCAATGGTGCTTCGGGGTATCAACCA
GAGGGCCATCTCTCCACAGTACCAGCCTGTTGTCATGCTGGAGAAGGGCTACACCATCCACTGGAATGGT
CCAGCGCCACGAACCACTTTCTTGTACCTCGTGAACTTCAACAAGGATGACTGGATCCGGGTTGGCCTCT
GTTACCCAGCCAACACGAGCTTTCAGGTTACCGTTGGCTTTCTGCAGCGGCAGAACGGCTCATTATCTAG
AATTGAGGACTATGAGCCTGCGCGGTCGATGGAGGAACTGCAGAAGAAGCCGTCTGAGAGAAAATTCTAT
TTTGACTCTGGCACAGGGTTATTGTTTCTGTATCTCAGAGCCCACAGCCACAGAGATGGCCACAGTTACT
GTTCATCTCAGGGATGTGAAAGAGTCAAGATTCAGGCAGCAACAGACTCCAAAGATATCAGTAACTGCAT
GGCCAAAGCGTACCCGCAGTATTACAAGAAGCCCTCGGCGGTCAAGCGCATGCCGGCCATGCTCACGGGG
CTCTGTCAAGGCTGTGGAACCCACCAGATGGTGTTTACCAGTGACCCTCACAAAAGCTACCTCCCTGTAC
GATTCCAGTCACCTGGGAAAGCAGAAATTCAGCGAGGAGATCCATCCATTATTTCCGTCAATGGTACTGA
CTTTACCTTCCGGAGTGCGGGTGCCCTCCTCCTCATTGTGGATGCCTGCAGTGTGCCCTTCCGGGTGAAG
GAAAAGCGGATGTTCCTTTCTGCAGACGTCAGTCACATGGAAGAATATTTCAAGGCTAGCATCCCCCCAA
GGTCAATCGTTCTGTTGAGCACAAGAGGAGAAATTAAGCAGCTGAATATCTCGGATTCATTAGCAGTTCT
GGGACTGGCCAAGCCAGCACATCTGTACAGCAAAGGTAGTGTCGTATTTTTGGGATTCAGCGGAAACTTC
GCACCGTCATGGACGAAGCTGTTCACCAGTCCCGATGAGCAGGGCCTCGGAGTGCTTGAGCAGTTTCTCC
CGTTGCAGATGGAGGAATATGGGTGCTCCCGGACCGGCAGTGTCCACAGAAGAGACCTTGACCTGTTACA
GCAGGCTTTGAAAGTGCTTTAG

Translation (1383 aa):
MYAAGSRGHSPAFLQPQNGNGHRSPGYVPGKVVPLRPAPPPKNHASAKLTSRSQDAPATFAFSPEEQRTP
SESRKRKRHKNTFICFAITSFSFFVALAVILGISSKYAPDENCPDQNPRLRNWDPGQDSAKHIVIKEGDL
FRLTSDATVDSIVIQDGGLLVFGDDKDGSKNITLRTRYILIQDGGALHIGAEKCRYRSKATITLYGKSDE
RESMPIFGKKFIGVEAGGTLELHGAQRTSWTMLARTLHSSGLPFGSYAFEKDFSRGLNVRVIDQDTARVL
ENEKFDTHEYHNESRRLQEFLRAQEPGRIVAIAVGDSAVKSLLQGTIQMIQDRLGSKLIQGLGYRQAWAL
VGVIDGGSSSCNESVRNYENHSTGGKALAQGEFYTLDGQKFSVTAYSEWSQGISLSGFRVDIADGVKLHL
LDDVSTWEAGDRIVVASTDYSMYQAEELTLLRCPECSRSQVKVKEIPQYLHVGEIIDGIDMRAEVGLLTR
NIVIQGEMEDSCYAENHCQFFDYDTFGGHVMIEKNFTSVHLSYVELKHMGQQHMGRYPVHFHLCGDVDSK
GGYSQPASVDGLSVHHSFSRCITVHGTSGLLIKDTIGFDTLGHCFFLEDGVEQRNILYHNLGLLTKPGTL
LPTDRNSSMCTVMRDGVFGNYVPVPTTDCMAVSTFWIAHPNNHLINNAAAGSQDAGIWYLFHKEPTGESS
GLQLLEKPELTPLGIFYNNRVHSNFKAGLFVDKGVKTTNASASDPREYLCLDNSARFRPHQDADPEKPRV
AAIIDRLIAFKNNDNGAWVRGGDIIVQNSAFADNGKGLTFASDGSFPSDEGSSQEVTESLFVGESRNYGF
QGGQNKYMGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTKSTFKKYVPTPDRYSSAIGFLMKNSWQTT
PRNNVSLVKFGPQVSLNVFFGKPGPWFEDCELDGDKNSIFHDIDGSVTGYKDTYVGRMDNYLIRHPNCVN
VTKWNAVICSGTYAQVYVQTWNTPNLSMIITRDEYPSHPMVLRGINQRAISPQYQPVVMLEKGYTIHWNG
PAPRTTFLYLVNFNKDDWIRVGLCYPANTSFQVTVGFLQRQNGSLSRIEDYEPARSMEELQKKPSERKFY
FDSGTGLLFLYLRAHSHRDGHSYCSSQGCERVKIQAATDSKDISNCMAKAYPQYYKKPSAVKRMPAMLTG
LCQGCGTHQMVFTSDPHKSYLPVRFQSPGKAEIQRGDPSIISVNGTDFTFRSAGALLLIVDACSVPFRVK
EKRMFLSADVSHMEEYFKASIPPRSIVLLSTRGEIKQLNISDSLAVLGLAKPAHLYSKGSVVFLGFSGNF
APSWTKLFTSPDEQGLGVLEQFLPLQMEEYGCSRTGSVHRRDLDLLQQALKVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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