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Report for CCDS35216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35216.1 Public Homo sapiens X ACOT9 24 110 108 CCDS HistoryNCBI Gene:23597Re-query CCDS DB by CCDS ID:35216.1Re-query CCDS DB by GeneID:23597See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336430.11 ENSP00000336580.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336430.11Link to Ensembl Protein Viewer:ENSP00000336580.7Re-query CCDS DB by Nucleotide ID:ENST00000336430Re-query CCDS DB by Protein ID:ENSP00000336580
Original member Current member NCBI NM_001033583.3 NP_001028755.2 Accepted alive Link to Nucleotide Sequence:NM_001033583.3Link to Protein Sequence:NP_001028755.2Re-query CCDS DB by Nucleotide ID:NM_001033583Re-query CCDS DB by Protein ID:NP_001028755Link to BLAST:NP_001028755.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028755.2 439 Q9Y305-1 439 100% 0 0

Chromosomal Locations for CCDS 35216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 23703894 23703982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23704694 23704844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23704993 23705080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23705509 23705594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23705768 23705858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23706628 23706739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23707877 23707944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23713135 23713208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23721881 23721984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23722670 23722753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23730527 23730564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23730816 23730986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23733172 23733217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23735919 23736016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23743125 23743144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGAGGCGGGCAGCACTGCGGCTTTGTGCCTTGGGCAAAGGGCAGCTTACTCCTGGAAGAGGACTGACTC
AAGGACCCCAGAACCCCAAGAAACAGGGAATCTTCCACATTCATGAAGTTCGAGATAAGTTGCGGGAGAT
AGTAGGAGCATCCACAAACTGGAGAGACCATGTGAAGGCAATGGAAGAAAGGAAATTACTTCATAGTTTC
TTGGCTAAATCACAGGATGGACTGCCTCCTAGGAGAATGAAGGACAGTTATATTGAAGTTCTCTTGCCTT
TGGGCAGTGAGCCTGAATTACGAGAGAAATATTTGACTGTTCAAAACACCGTAAGATTTGGCAGGATTCT
TGAGGATCTTGACAGCTTGGGAGTTCTTATTTGTTACATGCACAACAAAATCCACTCCGCCAAGATGTCT
CCTTTATCGATAGTTACAGCCCTGGTGGATAAGATTGATATGTGTAAGAAGAGCTTGAGCCCAGAACAGG
ACATTAAGTTCAGTGGCCATGTTAGCTGGGTCGGGAAGACATCCATGGAAGTGAAGATGCAAATGTTCCA
GTTACATGGTGATGAATTTTGTCCTGTTTTGGATGCAACATTTGTAATGGTGGCTCGTGATTCTGAAAAT
AAAGGGCCGGCATTTGTAAATCCACTCATCCCTGAAAGCCCAGAGGAAGAGGAGCTCTTTAGACAAGGGG
AATTGAACAAGGGGAGAAGAATTGCCTTCAGCTCCACGTCGTTACTGAAAATGGCCCCCAGCGCTGAGGA
GAGGACCACCATACATGAGATGTTTCTCAGCACACTGGATCCAAAGACTATAAGTTTTCGGAGTCGAGTT
TTACCCTCTAATGCAGTGTGGATGGAGAATTCAAAACTGAAGAGTTTGGAAATTTGCCACCCTCAGGAGC
GGAACATTTTCAATCGGATCTTTGGTGGTTTCCTTATGAGGAAGGCATATGAACTTGCGTGGGCTACTGC
TTGTAGCTTTGGTGGTTCTCGACCGTTTGTGGTAGCAGTAGATGACATCATGTTTCAGAAACCTGTTGAG
GTTGGCTCATTGCTCTTTCTTTCTTCACAGGTATGCTTTACTCAGAATAATTATATTCAAGTCAGAGTAC
ACAGTGAAGTGGCCTCCCTGCAGGAGAAGCAGCATACAACCACCAATGTCTTTCATTTCACGTTCATGTC
GGAAAAAGAAGTGCCATTGGTTTTCCCAAAAACATATGGAGAGTCCATGTTGTACTTAGATGGGCAGCGG
CATTTCAACTCCATGAGTGGCCCAGCGACCTTGAGAAAGGACTACCTTGTGGAGCCCTAA

Translation (439 aa):
MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHEVRDKLREIVGASTNWRDHVKAMEERKLLHSF
LAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMS
PLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSEN
KGPAFVNPLIPESPEEEELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRV
LPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVE
VGSLLFLSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGESMLYLDGQR
HFNSMSGPATLRKDYLVEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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