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Report for CCDS3419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3419.1 Public Homo sapiens 4 FGFBP2 24 110 108 CCDS HistoryNCBI Gene:83888Re-query CCDS DB by CCDS ID:3419.1Re-query CCDS DB by GeneID:83888See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259989.7 ENSP00000259989.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000259989.7Link to Ensembl Protein Viewer:ENSP00000259989.6Re-query CCDS DB by Nucleotide ID:ENST00000259989Re-query CCDS DB by Protein ID:ENSP00000259989
Original member Current member NCBI NM_031950.4 NP_114156.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031950.4Link to Protein Sequence:NP_114156.1Re-query CCDS DB by Nucleotide ID:NM_031950Re-query CCDS DB by Protein ID:NP_114156Link to BLAST:NP_114156.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114156.1 223 Q9BYJ0 223 100% 0 0

Chromosomal Locations for CCDS 3419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 15962458 15963129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGAAGTTCGTCCCCTGCCTCCTGCTGGTGACCTTGTCCTGCCTGGGGACTTTGGGTCAGGCCCCGAGGC
AAAAGCAAGGAAGCACTGGGGAGGAATTCCATTTCCAGACTGGAGGGAGAGATTCCTGCACTATGCGTCC
CAGCAGCTTGGGGCAAGGTGCTGGAGAAGTCTGGCTTCGTGTCGACTGCCGCAACACAGACCAGACCTAC
TGGTGTGAGTACAGGGGGCAGCCCAGCATGTGCCAGGCTTTCGCTGCTGACCCCAAACCTTACTGGAATC
AAGCCCTGCAGGAGCTGAGGCGCCTTCACCATGCGTGCCAGGGGGCCCCGGTGCTTAGGCCATCCGTGTG
CAGGGAGGCTGGACCCCAGGCCCATATGCAGCAGGTGACTTCCAGCCTCAAGGGCAGCCCAGAGCCCAAC
CAGCAGCCTGAGGCTGGGACGCCATCTCTGAGGCCCAAGGCCACAGTGAAACTCACAGAAGCAACACAGC
TGGGAAAGGACTCGATGGAAGAGCTGGGAAAAGCCAAACCCACCACCCGACCCACAGCCAAACCTACCCA
GCCTGGACCCAGGCCCGGAGGGAATGAGGAAGCAAAGAAGAAGGCCTGGGAACATTGTTGGAAACCCTTC
CAGGCCCTGTGCGCCTTTCTCATCAGCTTCTTCCGAGGGTGA

Translation (223 aa):
MKFVPCLLLVTLSCLGTLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLRVDCRNTDQTY
WCEYRGQPSMCQAFAADPKPYWNQALQELRRLHHACQGAPVLRPSVCREAGPQAHMQQVTSSLKGSPEPN
QQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEAKKKAWEHCWKPF
QALCAFLISFFRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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