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Report for CCDS32922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32922.1 Public Homo sapiens 19 STX10 24 110 108 CCDS HistoryNCBI Gene:8677Re-query CCDS DB by CCDS ID:32922.1Re-query CCDS DB by GeneID:8677See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32922.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587230.6 ENSP00000466298.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000587230.6Link to Ensembl Protein Viewer:ENSP00000466298.1Re-query CCDS DB by Nucleotide ID:ENST00000587230Re-query CCDS DB by Protein ID:ENSP00000466298
Original member Current member NCBI NM_003765.3 NP_003756.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003765.3Link to Protein Sequence:NP_003756.1Re-query CCDS DB by Nucleotide ID:NM_003765Re-query CCDS DB by Protein ID:NP_003756Link to BLAST:NP_003756.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003756.1 249 O60499-1 249 100% 0 0

Chromosomal Locations for CCDS 32922.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13144410 13144486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13144577 13144671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13144764 13144870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13145288 13145395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13149029 13149091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13149499 13149593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13149728 13149897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13150139 13150173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGTCTCTCGAAGACCCCTTTTTTGTAGTCCGAGGCGAGGTGCAGAAGGCGGTGAACACGGCCCGCGGGC
TGTACCAGCGCTGGTGCGAGCTCCTGCAGGAAAGCGCGGCGGTCGGACGCGAGGAGCTGGACTGGACGAC
CAATGAGCTGCGGAATGGCCTGCGCAGCATCGAGTGGGACCTCGAGGACCTGGAAGAGACCATCGGTATA
GTGGAAGCCAACCCAGGCAAGTTCAAGCTCCCAGCCGGGGACCTGCAGGAGAGAAAGGTGTTCGTGGAGC
GGATGCGAGAGGCAGTCCAGGAAATGAAGGACCATATGGTCAGCCCAACAGCCGTAGCATTTTTGGAGAG
GAATAACAGAGAGATACTCGCAGGCAAGCCAGCTGCCCAGAAGTCACCCAGCGACCTGCTGGATGCCAGC
GCAGTCTCGGCCACATCTCGCTACATCGAGGAGCAGCAGGCCACACAGCAGCTGATCATGGATGAACAGG
ATCAACAGCTGGAGATGGTGTCTGGGAGCATCCAGGTTCTGAAGCACATGTCCGGCCGCGTTGGAGAAGA
GCTGGACGAGCAGGGCATCATGCTGGATGCCTTCGCCCAAGAGATGGACCACACCCAGTCCCGCATGGAC
GGGGTCCTCAGGAAGTTGGCCAAAGTATCCCACATGACGAGTGACCGCCGACAGTGGTGTGCCATCGCCG
TGCTAGTGGGGGTGCTTCTCCTCGTTCTCATCTTACTATTCTCTCTCTGA

Translation (249 aa):
MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGI
VEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDAS
AVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMD
GVLRKLAKVSHMTSDRRQWCAIAVLVGVLLLVLILLFSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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