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Report for CCDS32680.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32680.3 Public Homo sapiens 17 MYCBPAP 24 110 108 CCDS HistoryNCBI Gene:84073Re-query CCDS DB by CCDS ID:32680.3Re-query CCDS DB by GeneID:84073See the combined annotation on chromosome 17 in Sequence Viewer

Public Note for CCDS 32680.2
The coding region has been updated to shorten the N-terminus to one that is more supported by conservation.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32680.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323776.11 ENSP00000323184.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323776.11Link to Ensembl Protein Viewer:ENSP00000323184.6Re-query CCDS DB by Nucleotide ID:ENST00000323776Re-query CCDS DB by Protein ID:ENSP00000323184
Original member Current member NCBI NM_032133.6 NP_115509.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032133.6Link to Protein Sequence:NP_115509.5Re-query CCDS DB by Nucleotide ID:NM_032133Re-query CCDS DB by Protein ID:NP_115509Link to BLAST:NP_115509.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115509.5 941 Q8TBZ2-2 941 100% 0 0

Chromosomal Locations for CCDS 32680.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50508675 50508750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50516570 50516697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50517293 50517452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50517595 50517698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50518541 50518724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50518974 50519089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50519640 50519787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50521110 50521225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50521316 50521431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50521973 50522081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50522939 50523128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50523597 50523784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50524877 50525023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50525881 50526267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50527287 50527408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50528155 50528270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50528695 50528840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50529018 50529188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50531327 50531428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2826 nt):
ATGAAGTCTCTAAAGAAGGATTCCCGCCTCAGAATAACTCCGACCAGATTATTAGAGGCCTCAGAGAATG
TCAAAGAAAAGAAGCGGGCAAAGGGACCTGAACAACCCACACCCACAATTCAGGAAGAGCCTGAACCTGT
TAGCAATGTCCTACAAGGAGATGACATTCTTGCCTTGGCCATTAAGAAGGAAGACTTGAAGGAGCAACAC
ATTCCTCGCCTTACTGAAAAGGAAGATAAACGTGTCATCACCCAGAAATTTATCATCCGTAAACTCAAAC
CCATGGATCCTAGGAGGAAGGTCTGCCACCTTGTAGCACGTCCTGCGAATCCTGATGAAGCCACAAAGCC
TCTGGACTACTCCGGTCCCGGTGACAGCTTCGATGGCAGTGACCAGATCCTGCCCCACCACATCTTGGGG
AGTCTCCAGGATTTTAAGAGAATTGCACTTGCTCGAGGGAACACCCAGCTGGCTGAGCGGATACCTACCT
CACCCTGTCTGATGACCCTCATCTCTGCTGAAGGAGAGTCAAAGCAAAAAGCCCCAAAAGAAGAGAAGAG
ACCTCCCTGGGCCCCACCTCCTCAGCACAACTTTCTGAAAAACTGGCAGCGTAACACAGCCCTGCGGAAG
AAGCAGCAGGAAGCCCTCAGCGAACACCTAAAGAAGCCAGTGAGTGAGCTGCTCATGCACACCGGGGAGA
CCTACAGACGGATCCAGGAGGAGCGGGAGCTCATTGACTGCACACTTCCAACCCGGCGTGATAGGAAAAG
CTGGGAGAACAGTGGGTTCTGGAGTCGACTGGAATACTTGGGAGATGAGATGACAGGTCTGGTCATGACC
AAGACAAAAACTCAGCGTGGCCTCATGGAGCCCATCACTCACATCAGGAAGCCCCACTCCATCCGGGTGG
AGACAGGATTACCAGCCCAGAGGGACGCTTCATACCGCTACACCTGGGATCGGAGTCTGTTTCTGATCTA
CCGACGCAAGGAGCTGCAGAGAATCATGGAAGAGCTGGATTTCAGCCAGCAGGATATTGATGGCCTGGAG
GTGGTGGGCAAAGGGTGGCCCTTCTCGGCTGTTACTGTGGAAGACTACACAGTGTTTGAAAGAAGTCAGG
GAAGCTCCTCTGAAGACACAGCATACTTAGGCACATTGGCCAGTTCCTCTGATGTCTCCATGCCTATTCT
CGGCCCTTCTCTGCTGTTCTGTGGGAAGCCAGCTTGCTGGATCAGAGGCAGTAATCCACAGGACAAGAGG
CAGGTTGGGATTGCTGCTCACTTGACCTTTGAAACCCTAGAAGGCGAGAAAACCTCCTCAGAACTGACTG
TGGTCAATAATGGCACCGTGGCCATTTGGTATGACTGGCGACGGCAGCACCAGCCGGACACTTTCCAAGA
CCTTAAGAAAAACAGGATGCAGCGATTTTACTTTGACAACCGGGAAGGTGTGATTCTGCCTGGAGAAATT
AAAACATTTACCTTCTTCTTCAAGTCTTTGACTGCTGGGGTCTTCAGGGAATTTTGGGAGTTTCGAACCC
ATCCTACTCTATTAGGAGGTGCTATACTGCAGGTCAATCTCCACGCGGTCTCCCTGACCCAGGACGTTTT
TGAGGATGAGAGGAAAGTACTGGAGAGCAAGCTGACTGCCCATGAGGCAGTCACCGTCGTTCGCGAAGTG
CTGCAGGAGCTGCTGATGGGGGTCTTGACCCCGGAGCGCACACCATCACCTGTGGATGCCTATCTCACCG
AGGAAGACTTGTTCCGGCACAGAAATCCTCCGCTGCATTATGAGCACCAAGTGGTGCAAAGCCTGCACCA
ACTGTGGCGCCAGTACATGACCCTGCCCGCCAAGGCTGAGGAGGCCAGGCCAGGGGACAAGGAGCACGTC
AGCCCCATAGCCACAGAGAAGGCCTCTGTGAATGCTGAGCTGTTACCACGCTTTAGGAGCCCCATCTCCG
AAACTCAAGTGCCCCGGCCTGAGAACGAGGCCCTCAGGGAATCCGGGTCCCAGAAGGCCAGAGTGGGGAC
CAAGAGTCCTCAGCGGAAGAGCATCATGGAGGAGATCCTGGTGGAGGAAAGCCCAGATGTGGACAGCACC
AAGAGCCCCTGGGAGCCGGATGGCCTTCCCCTGCTGGAGTGGAACCTCTGCTTGGAGGACTTCAGAAAGG
CAGTGATGGTGCTCCCTGATGAGAACCACAGAGAGGATGCGTTGATGAGGCTCAACAAAGCAGCCCTGGA
GCTGTGCCAGAAGCCAAGGCCATTGCAGTCCAACCTCCTGCACCAGATGTGTTTGCAGCTGTGGCGAGAT
GTGATTGACAGCCTGGTGGGCCATTCCATGTGGCTGAGGTCTGTGCTGGGCCTGCCTGAGAAGGAGACCA
TCTATTTGAATGTGCCTGAAGAGCAAGATCAAAAATCACCTCCTATCATGGAAGTGAAGGTACCTGTGGG
GAAAGCTGGGAAGGAGGAGCGGAAAGGAGCAGCCCAGGAAAAGAAGCAACTGGGGATCAAAGACAAAGAA
GACAAGAAAGGAGCCAAGCTGCTCGGGAAAGAGGACCGTCCCAACAGCAAGAAGCACAAGGCAAAGGATG
ACAAGAAAGTCATAAAATCTGCAAGTCAGGACAGGTTTTCTTTGGAAGACCCTACCCCTGACATCATCCT
CTCTTCTCAAGAACCCATAGACCCCCTGGTCATGGGGAAATACACCCAGAGCCTGCACAGTGAGGTCCGT
GGGCTGCTGGACACCCTGGTGACTGACCTGATGGTCCTGGCTGATGAGCTCAGCCCCATAAAGAATGTCG
AGGAGGCTTTGCGCCTCTGCAGGTGA

Translation (941 aa):
MKSLKKDSRLRITPTRLLEASENVKEKKRAKGPEQPTPTIQEEPEPVSNVLQGDDILALAIKKEDLKEQH
IPRLTEKEDKRVITQKFIIRKLKPMDPRRKVCHLVARPANPDEATKPLDYSGPGDSFDGSDQILPHHILG
SLQDFKRIALARGNTQLAERIPTSPCLMTLISAEGESKQKAPKEEKRPPWAPPPQHNFLKNWQRNTALRK
KQQEALSEHLKKPVSELLMHTGETYRRIQEERELIDCTLPTRRDRKSWENSGFWSRLEYLGDEMTGLVMT
KTKTQRGLMEPITHIRKPHSIRVETGLPAQRDASYRYTWDRSLFLIYRRKELQRIMEELDFSQQDIDGLE
VVGKGWPFSAVTVEDYTVFERSQGSSSEDTAYLGTLASSSDVSMPILGPSLLFCGKPACWIRGSNPQDKR
QVGIAAHLTFETLEGEKTSSELTVVNNGTVAIWYDWRRQHQPDTFQDLKKNRMQRFYFDNREGVILPGEI
KTFTFFFKSLTAGVFREFWEFRTHPTLLGGAILQVNLHAVSLTQDVFEDERKVLESKLTAHEAVTVVREV
LQELLMGVLTPERTPSPVDAYLTEEDLFRHRNPPLHYEHQVVQSLHQLWRQYMTLPAKAEEARPGDKEHV
SPIATEKASVNAELLPRFRSPISETQVPRPENEALRESGSQKARVGTKSPQRKSIMEEILVEESPDVDST
KSPWEPDGLPLLEWNLCLEDFRKAVMVLPDENHREDALMRLNKAALELCQKPRPLQSNLLHQMCLQLWRD
VIDSLVGHSMWLRSVLGLPEKETIYLNVPEEQDQKSPPIMEVKVPVGKAGKEERKGAAQEKKQLGIKDKE
DKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQDRFSLEDPTPDIILSSQEPIDPLVMGKYTQSLHSEVR
GLLDTLVTDLMVLADELSPIKNVEEALRLCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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