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Report for CCDS31963.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31963.1 Public Homo sapiens 13 VWA8 24 110 108 CCDS HistoryNCBI Gene:23078Re-query CCDS DB by CCDS ID:31963.1Re-query CCDS DB by GeneID:23078See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31963.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281496.6 ENSP00000281496.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000281496.6Link to Ensembl Protein Viewer:ENSP00000281496.6Re-query CCDS DB by Nucleotide ID:ENST00000281496Re-query CCDS DB by Protein ID:ENSP00000281496
Original member Current member NCBI NM_001009814.2 NP_001009814.1 Accepted alive Link to Nucleotide Sequence:NM_001009814.2Link to Protein Sequence:NP_001009814.1Re-query CCDS DB by Nucleotide ID:NM_001009814Re-query CCDS DB by Protein ID:NP_001009814Link to BLAST:NP_001009814.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009814.1 1039 A3KMH1-2 1039 100% 0 0

Chromosomal Locations for CCDS 31963.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 41719587 41719742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41721370 41721575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41727194 41727313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41729542 41729677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41732080 41732155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41761128 41761204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41777985 41778056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41783795 41783901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41787437 41787543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41811225 41811340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41816698 41816775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41819218 41819386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41830529 41830642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41833371 41833531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41865736 41865813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41865902 41866036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41868346 41868477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41883387 41883491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41885920 41886028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41886781 41886830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41887197 41887361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41891420 41891587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41907586 41907696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41912038 41912168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41949936 41950013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41960853 41961015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3120 nt):
ATGCAATCCCGGCTTCTACTCCTCGGGGCACCCGGAGGCCACGGCGGCCCGGCCTCGCGGCGCATGCGGC
TGCTCCTGCGGCAGGTGGTGCAGCGCAGGCCGGGTGGCGACAGGCAGCGGCCGGAGGTCAGACTGTTGCA
CGCCGGCTCGGGGGCCGACACAGGTGATACAGTTAATATTGGAGATGTATCCTACAAGTTGAAAATTCCT
AAGAATCCAGAACTTGTGCCACAGAACTACATTTCAGACTCTCTGGCTCAATCTGTAGTTCAGCATCTAA
GATGGATAATGCAGAAGGATCTTTTGGGGCAAGATGTTTTTCTAATAGGACCTCCTGGGCCTCTTCGACG
CTCTATTGCTATGCAGTACTTGGAGCTGACCAAACGGGAGGTCGAATACATTGCCCTGTCAAGGGACACC
ACTGAAACTGATCTCAAACAGCGACGAGAGATCCGTGCAGGCACAGCCTTTTACATTGATCAGTGTGCAG
TTCGTGCAGCCACAGAAGGCAGAACTCTCATTTTGGAAGGTTTGGAAAAGGCAGAGAGGAATGTTTTGCC
TGTTTTGAACAACTTGCTGGAAAACAGAGAGATGCAGCTTGAAGATGGACGCTTCCTGATGTCTGCTGAG
CGTTACGACAAACTTCTCCGAGATCATACCAAAAAAGAGTTGGATTCTTGGAAAATTGTCCGAGTTAGTG
AAAATTTCCGAGTGATTGCCTTGGGCTTGCCAGTGCCAAGGTATTCTGGGAATCCATTAGACCCCCCTCT
TCGTTCTCGATTTCAAGCCAGGGATATTTATTATTTACCCTTCAAGGACCAACTTAAGTTGTTATATTCA
ATTGGAGCCAATGTTTCTGCTGAGAAAGTTTCTCAGCTCTTGTCCTTTGCCACAACTCTGTGTTCCCAAG
AATCTTCTACTCTTGGACTTCCAGACTTTCCTTTAGATAGTTTAGCAGCTGCGGTTCAAATCTTGGATTC
CTTTCCTATGATGCCAATCAAACATGCAATCCAGTGGCTTTATCCATATAGTATTTTACTAGGTCATGAA
GGGAAGATGGCTGTGGAAGGTGTTTTAAAGCGCTTTGAACTTCAAGATTCAGGAAGCTCTCTACTTCCTA
AAGAGATTGTAAAAGTAGAGAAGATGATGGAAAACCATGTGTCCCAAGCTTCTGTGACCATCCGGATTGC
AGATAAAGAGGTGACCATTAAGGTGCCAGCCGGGACCAGGCTATTAAGTCAACCTTGTGCGTCAGACCGT
TTCATACAGACTTTGAGCCATAAGCAGCTACAGGCTGAAATGATGCAGTCTCACATGGTTAAAGATATAT
GTTTAATTGGAGGAAAGGGTTGTGGAAAAACAGTGATCGCTAAGAACTTTGCCGATACCTTAGGATACAA
CATAGAACCTATTATGCTCTATCAGGATATGACAGCGCGTGATCTGCTACAGCAGAGATACACCCTTCCA
AATGGAGACACTGCCTGGCGGTCCTCACCCCTTGTGAATGCTGCTCTGGAAGGCAAGCTGGTCCTGCTGG
ATGGCATTCACCGGGTGAATGCGGGCACGCTTGCTGTATTGCAAAGGTTAATCCATGATCGAGAGCTAAG
CCTCTATGATGGTTCTAGGCTGCTGAGAGAAGACAGGTATATGCGTTTAAAGGAGGAGCTGCAACTGTCT
GATGAACAGCTACAGAAGAGATCCATTTTTCCTATCCATCCCTCCTTCAGAATCATTGCCTTGGCAGAAC
CCCCTGTTATTGGAAGCACAGCACACCAGTGGCTGGGACCAGAATTCTTAACCATGTTCTTTTTCCATTA
CATGAAACCACTTGTGAAAAGTGAAGAAATCCAAGTGATTAAGGAAAAGGTCCCAAATGTACCTCAGGAA
GCTCTGGATAAGTTATTATCATTTACACACAAACTCAGAGAAACACAGGATCCAACGGCACAATCATTAG
CGGCATCACTTTCTACCAGACAACTGTTGCGAATTTCTCGTCGGCTGTCACAGTATCCTAATGAAAATCT
TCACAGTGCTGTTACTAAAGCCTGCCTTTCCAGGTTTTTACCCAGTCTTGCTAGGTCAGCATTAGAAAAA
AATCTGGCAGATGCTACAATAGAAATAAATACTGATGACAATTTGGAGCCAGAACTGAAGGATTACAAAT
GTGAAGTAACATCTGGAACTCTGAGGATTGGTGCTGTTAGTGCACCGATCTATAATGCACATGAGAAAAT
GAAAGTGCCTGATGTTCTTTTCTATGACAACATTCAGCATGTGATAGTGATGGAAGATATGCTGAAAGAC
TTTCTCCTTGGAGAACACTTATTATTGGTTGGCAACCAGGGTGTAGGAAAAAACAAGATTGTTGACAGAT
TCCTTCACCTGCTCAACAGACCCCGAGAATATATTCAGCTACACAGGGATACCACAGTACAAACTCTTAC
GCTTCAGCCTTCGGTTAAAGACGGACTTATTGTATATGAAGACTCACCTTTGGTTAAAGCAGTAAAGTTG
GGTCATATTCTGGTAGTAGATGAGGCTGACAAAGCTCCAACAAATGTCACGTGTATTTTAAAAACTCTAG
TAGAAAATGGAGAAATGATTCTAGCAGATGGAAGACGCATTGTTGCAAATTCTGCTAATGTGAATGGAAG
AGAAAATGTTGTAGTGATTCATCCTGATTTTAGGATGATTGTTCTGGCAAATAGACCTGGATTTCCTTTC
CTAGGCAATGATTTCTTCGGTACCTTAGGTGATATTTTTAGCTGCCATGCAGTTGATAACCCCAAACCCC
ACTCGGAGCTCGAGATGCTCAGACAGTATGGACCAAATGTGCCTGAGCCCATCCTTCAGAAGCTTGTGGC
TGCCTTTGGAGAGCTGAGGAGTTTGGCTGACCAAGGGATTATTAACTATCCTTATTCTACCAGAGAAGTT
GTCAACATAGTCAAACATTTACAGAAATTTCCGACTGAAGGTCTCTCCAGTGTAGTTCGAAATGTGTTTG
ACTTTGATTCCTACAACAATGACATGAGGGAGATATTGATTAACACTTTACACAAATACGGGATACCTAT
CGGAGCAAAGCCTACCAGTGTGCAGCTGGCAAAGGAGTAA

Translation (1039 aa):
MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNIGDVSYKLKIP
KNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDT
TETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAE
RYDKLLRDHTKKELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYS
IGANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHE
GKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLLQQRYTLP
NGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLS
DEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQE
ALDKLLSFTHKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEK
NLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKD
FLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMIVLANRPGFPF
LGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREV
VNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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