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Report for CCDS31615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31615.1 Public Homo sapiens 11 PELI3 24 110 108 CCDS HistoryNCBI Gene:246330Re-query CCDS DB by CCDS ID:31615.1Re-query CCDS DB by GeneID:246330See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31615.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320740.12 ENSP00000322532.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320740.12Link to Ensembl Protein Viewer:ENSP00000322532.7Re-query CCDS DB by Nucleotide ID:ENST00000320740Re-query CCDS DB by Protein ID:ENSP00000322532
Original member Current member NCBI NM_145065.3 NP_659502.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145065.3Link to Protein Sequence:NP_659502.2Re-query CCDS DB by Nucleotide ID:NM_145065Re-query CCDS DB by Protein ID:NP_659502Link to BLAST:NP_659502.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659502.2 469 Q8N2H9-1 469 100% 0 0

Chromosomal Locations for CCDS 31615.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66468129 66468280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66468833 66468904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66471242 66471371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66472369 66472470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66473241 66473435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66473737 66473925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66475598 66476167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1410 nt):
ATGGTGCTGGAAGGAAACCCTGAAGTGGGGTCCCCCCGAACCTCAGACCTCCAGCACCGGGGGAACAAGG
GCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACT
CATCGTCCTGGGATGCTGTGAGGAAGGAGGTGAGGAAACCGAGGCTCAGAGAGGGGAAGTGACTGGCCCA
AGGGCACACAGCTGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCAC
TGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTC
CAAGGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTCGGTCATAGTG
GAGTATACACATGATAGCGACACAGACATGTTCCAGATTGGCCGCTCCACAGAGAACATGATTGACTTCG
TGGTAACAGACACGTCCCCTGGAGGAGGGGCTGCCGAGGGCCCTTCTGCCCAGAGCACCATCTCCCGCTA
TGCCTGCCGCATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGCATCTATGCCGCTGGCTTCGATGCC
TCTAGCAACATCTTCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGATGGCCTGATGGATGGACTGA
CCACCAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCG
GGAGATCTCGGTCTGTGGGAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTG
GTGGAAAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCATCGACCTGTGTGGGGCCACACTGCTGTGGC
GCACACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGC
AGCGCGGCCCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACAGCG
CCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCACGTCCATGGCTACCACGGCTGGGGCTGCC
GGCGGGAGCGGGGCCCCCAGGAGCGCGAATGTCCTCTCTGCCGCCTTGTGGGGCCTTATGTGCCTCTATG
GCTTGGCCAGGAGGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
GTCTGCTCTGAGAAGACTGCCCGCTACTGGGCCCAGACACCACTGCCCCACGGCACCCATGCTTTCCATG
CCGCCTGCCCCTTTTGCGGGGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCC
GCTGGATTAG

Translation (469 aa):
MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEETEAQRGEVTGP
RAHSCYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIV
EYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARIYAAGFDA
SSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKL
VENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTA
PDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH
VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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