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Report for CCDS31529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31529.1 Public Homo sapiens 11 OR8J1 24 110 108 CCDS HistoryNCBI Gene:219477Re-query CCDS DB by CCDS ID:31529.1Re-query CCDS DB by GeneID:219477See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31529.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303039.3 ENSP00000304060.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000303039.3Link to Ensembl Protein Viewer:ENSP00000304060.3Re-query CCDS DB by Nucleotide ID:ENST00000303039Re-query CCDS DB by Protein ID:ENSP00000304060
Original member Current member EBI ENST00000533152.3 ENSP00000477259.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533152.3Link to Ensembl Protein Viewer:ENSP00000477259.3Re-query CCDS DB by Nucleotide ID:ENST00000533152Re-query CCDS DB by Protein ID:ENSP00000477259
Original member Current member NCBI NM_001005205.3 NP_001005205.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005205.3Link to Protein Sequence:NP_001005205.2Re-query CCDS DB by Nucleotide ID:NM_001005205Re-query CCDS DB by Protein ID:NP_001005205Link to BLAST:NP_001005205.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005205.2 316 Q8NGP2 316 100% 0 0

Chromosomal Locations for CCDS 31529.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56360247 56361197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCTCCTGAAAATTTCACCAGAGTCACTGAGTTTATTCTTACAGGTGTCTCTAGCTGTCCAGAGCTCC
AGATTCCCCTCTTCCTGGTCTTTCTGGTGCTCTATGGGCTGACCATGGCAGGGAACCTGGGCATCATCAC
CCTCACCAGTGTTGACTCTCGACTTCAAACCCCCATGTACTTTTTCCTGCAACATCTGGCTCTCATTAAT
CTTGGTAACTCTACTGTCATTGCCCCTAAAATGCTGATTAACTTTTTAGTAAAGAAGAAAACTACCTCAT
TCTATGAATGTGCCACCCAACTGGGAGGGTTCTTGTTCTTTATTGTATCGGAGGTAATCATGCTGGCTTT
GATGGCCTATGACCGCTATGTGGCTATTTGTAACCCTCTGCTGTACATGGTGGTGGTGTCTCGGCGGCTC
TGCCTCCTGCTGGTCTCCCTCACATACCTCTATGGCTTTTCTACAGCTATTGTGGTTTCATCTTATGTAT
TCTCTGTGTCTTATTGCTCTTCTAATATAATCAATCATTTTTACTGTGATAATGTTCCTCTGTTAGCATT
ATCTTGCTCTGATACTTACTTACCAGAAACAGTTGTCTTTATATCTGCAGCAACAAATGTGGTTGGTTCC
TTGATTATAGTTCTAGTATCTTATTTCAATATTGTTTTGTCTATTTTAAAAATATGTTCATCAGAAGGAA
GGAAAAAAGCCTTTTCTACCTGTGCTTCACATATGATGGCAGTCACAATTTTTTATGGGACATTGCTATT
CATGTATGTGCAGCCCCGAAGTAACCATTCACTGGATACTGATGATAAGATGGCTTCTGTGTTTTACACG
TTGGTAATTCCTATGCTGAATCCCTTGATCTACAGCCTGAGGAATAAGGATGTGAAGACTGCTCTACAGA
GATTCATGACAAATCTGTGCTATTCCTTTAAAACAATGTAA

Translation (316 aa):
MAPENFTRVTEFILTGVSSCPELQIPLFLVFLVLYGLTMAGNLGIITLTSVDSRLQTPMYFFLQHLALIN
LGNSTVIAPKMLINFLVKKKTTSFYECATQLGGFLFFIVSEVIMLALMAYDRYVAICNPLLYMVVVSRRL
CLLLVSLTYLYGFSTAIVVSSYVFSVSYCSSNIINHFYCDNVPLLALSCSDTYLPETVVFISAATNVVGS
LIIVLVSYFNIVLSILKICSSEGRKKAFSTCASHMMAVTIFYGTLLFMYVQPRSNHSLDTDDKMASVFYT
LVIPMLNPLIYSLRNKDVKTALQRFMTNLCYSFKTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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