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Report for CCDS30526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30526.1 Public Mus musculus X Gpm6b 23 108 98 CCDS HistoryNCBI Gene:14758Re-query CCDS DB by CCDS ID:30526.1Re-query CCDS DB by GeneID:14758See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30526.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060210.13 ENSMUSP00000060442.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060210.13Link to Ensembl Protein Viewer:ENSMUSP00000060442.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000060210Re-query CCDS DB by Protein ID:ENSMUSP00000060442
Original member NCBI NM_023122.3 NP_075611.1 Updated not alive Link to Nucleotide Sequence:NM_023122.3Link to Protein Sequence:NP_075611.1Re-query CCDS DB by Nucleotide ID:NM_023122Re-query CCDS DB by Protein ID:NP_075611
Current member NCBI NM_023122.4 NP_075611.1 Accepted alive Link to Nucleotide Sequence:NM_023122.4Link to Protein Sequence:NP_075611.1Re-query CCDS DB by Nucleotide ID:NM_023122Re-query CCDS DB by Protein ID:NP_075611Link to BLAST:NP_075611.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075611.1 269 P35803-3 269 100% 0 0

Chromosomal Locations for CCDS 30526.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 166239133 166239136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 166372638 166372824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 166375633 166375789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 166379988 166380159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 166382449 166382522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 166383935 166384000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 166386952 166387101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGGGTTGCTTCGAATGCTGCATCAAGTGTCTGGGAGGAGTTCCCTATGCCTCCCTGGTGGCCACCATCC
TATGTTTCTCTGGAGTGGCCTTGTTCTGTGGCTGTGGGCATGTGGCTCTTGCAGGCACCGTGGCAATTCT
TGAGCAACACTTCTCCACCAACACCAGTGACCATGCCTTGCTGAGTGAAGTGATCCAACTGATGCAGTAT
GTTATCTATGGAATCGCCTCCTTTTTCTTCCTGTATGGCATCATTCTTCTGGCAGAAGGCTTCTACACCA
CAAGTGCAGTGAAAGAGCTGCACGGTGAGTTTAAAACAACTGCCTGTGGCCGATGCATCAGTGGAATGTT
CGTGTTCCTCACCTATGTGCTGGGAGTGGCCTGGCTGGGTGTGTTCGGCTTTTCCGCAGTGCCAGTGTTT
ATGTTCTACAACATCTGGTCAACCTGTGAAGTCATCAAGTCCCCACAAAGCAACGGGACCTCGGGTGTGG
AGCAGATCTGTGTGGATGTCCGGCAATATGGTATCATTCCTTGGAATGCTTTCCCAGGCAAAATCTGTGG
CTCGGCCTTGGAGAACATCTGCAACACGAATGAGTTCTACATGTCCTATCACCTGTTCATTGTGGCTTGT
GCTGGAGCTGGTGCCACCGTCATTGCCCTGATCCACTTCCTCATGATACTGTCTTCTAACTGGGCTTACT
TAAAGGATGCAAGCAAAATGCAGGCTTACCAGGATATCAAAGCAAAGGAAGAGCAGGAACTGCAAGATAT
CCAGTCTCGCTCAAAAGAACAACTCAATTCTTACACTTAA

Translation (269 aa):
MGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNTSDHALLSEVIQLMQY
VIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVF
MFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVAC
AGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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