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Report for CCDS30312.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30312.1 Public Mus musculus X Il2rg 23 108 98 CCDS HistoryNCBI Gene:16186Re-query CCDS DB by CCDS ID:30312.1Re-query CCDS DB by GeneID:16186See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 30312.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033664.13 ENSMUSP00000033664.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033664.13Link to Ensembl Protein Viewer:ENSMUSP00000033664.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033664Re-query CCDS DB by Protein ID:ENSMUSP00000033664
Original member Current member NCBI NM_013563.4 NP_038591.1 Accepted alive Link to Nucleotide Sequence:NM_013563.4Link to Protein Sequence:NP_038591.1Re-query CCDS DB by Nucleotide ID:NM_013563Re-query CCDS DB by Protein ID:NP_038591Link to BLAST:NP_038591.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038591.1 369 P34902 369 100% 0 0

Chromosomal Locations for CCDS 30312.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101264852 101265037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101265376 101265442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101265630 101265726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101266181 101266343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101266978 101267120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101267311 101267495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101267711 101267864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101268055 101268169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGTTGAAACTATTATTGTCACCTAGATCCTTCTTAGTCCTTCAGCTGCTCCTGCTGAGGGCAGGGTGGA
GCTCCAAGGTCCTCATGTCCAGTGCGAATGAAGACATCAAAGCTGATTTGATCCTGACTTCTACAGCCCC
TGAACACCTCAGTGCTCCTACTCTGCCCCTTCCAGAGGTTCAGTGCTTTGTGTTCAACATAGAGTACATG
AATTGCACTTGGAATAGCAGTTCTGAGCCTCAGGCAACCAACCTCACGCTGCACTATAGGTACAAGGTAT
CTGATAATAATACATTCCAGGAGTGCAGTCACTATTTGTTCTCCAAAGAGATTACTTCTGGCTGTCAGAT
ACAAAAAGAAGATATCCAGCTCTACCAGACATTTGTTGTCCAGCTCCAGGACCCCCAGAAACCCCAGAGG
CGAGCTGTACAGAAGCTAAACCTACAGAATCTTGTGATCCCACGGGCTCCAGAAAATCTAACACTCAGCA
ATCTGAGTGAATCCCAGCTAGAGCTGAGATGGAAAAGCAGACATATTAAAGAACGCTGTTTACAATACTT
GGTGCAGTACCGGAGCAACAGAGATCGAAGCTGGACGGAACTAATAGTGAATCATGAACCTAGATTCTCC
CTGCCTAGTGTGGATGAGCTGAAACGGTACACATTTCGGGTTCGGAGCCGCTATAACCCAATCTGTGGAA
GTTCTCAACAGTGGAGTAAATGGAGCCAGCCTGTCCACTGGGGGAGTCATACTGTAGAGGAGAATCCTTC
CTTGTTTGCACTGGAAGCTGTGCTTATCCCTGTTGGCACCATGGGGTTGATTATTACCCTGATCTTTGTG
TACTGTTGGTTGGAACGAATGCCTCCAATTCCCCCCATCAAGAATCTAGAGGATCTGGTTACTGAATACC
AAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACTGAGAGTCTGCAGCCAGACTACAGTGA
ACGGTTCTGCCACGTCAGCGAGATTCCCCCCAAAGGAGGGGCCCTAGGAGAGGGGCCTGGAGGTTCTCCT
TGCAGCCTGCATAGCCCTTACTGGCCTCCCCCATGTTATTCTCTGAAGCCGGAAGCCTGA

Translation (369 aa):
MLKLLLSPRSFLVLQLLLLRAGWSSKVLMSSANEDIKADLILTSTAPEHLSAPTLPLPEVQCFVFNIEYM
NCTWNSSSEPQATNLTLHYRYKVSDNNTFQECSHYLFSKEITSGCQIQKEDIQLYQTFVVQLQDPQKPQR
RAVQKLNLQNLVIPRAPENLTLSNLSESQLELRWKSRHIKERCLQYLVQYRSNRDRSWTELIVNHEPRFS
LPSVDELKRYTFRVRSRYNPICGSSQQWSKWSQPVHWGSHTVEENPSLFALEAVLIPVGTMGLIITLIFV
YCWLERMPPIPPIKNLEDLVTEYQGNFSAWSGVSKGLTESLQPDYSERFCHVSEIPPKGGALGEGPGGSP
CSLHSPYWPPPCYSLKPEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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