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Report for CCDS30064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30064.1 Public Mus musculus X Ube2a 23 108 98 CCDS HistoryNCBI Gene:22209Re-query CCDS DB by CCDS ID:30064.1Re-query CCDS DB by GeneID:22209See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30064.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016452.10 ENSMUSP00000016452.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016452.10Link to Ensembl Protein Viewer:ENSMUSP00000016452.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000016452Re-query CCDS DB by Protein ID:ENSMUSP00000016452
Original member Current member NCBI NM_019668.4 NP_062642.1 Accepted alive Link to Nucleotide Sequence:NM_019668.4Link to Protein Sequence:NP_062642.1Re-query CCDS DB by Nucleotide ID:NM_019668Re-query CCDS DB by Protein ID:NP_062642Link to BLAST:NP_062642.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062642.1 152 Q9Z255 152 100% 0 0

Chromosomal Locations for CCDS 30064.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 36874486 36874529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36874711 36874791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36875167 36875192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36881657 36881746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36882599 36882687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36883012 36883140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGTCGACCCCGGCCCGGCGCCGCCTCATGAGGGACTTCAAGAGGTTACAGGAAGATCCTCCGGCCGGAG
TGAGCGGGGCTCCGTCGGAGAACAACATAATGGTTTGGAATGCGGTCATTTTTGGGCCCGAAGGGACCCC
GTTTGAGGATGGAACATTTAAGCTTACAATTGAATTCACTGAAGAGTATCCTAATAAGCCACCTACTGTT
AGATTTGTCTCTAAGATGTTCCATCCTAACGTCTATGCAGATGGTAGTATATGTCTGGATATACTTCAGA
ACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTTTAACGTCCATACAGTCTCTATTGGATGAACCTAA
TCCCAATAGTCCAGCAAACAGCCAGGCTGCCCAGCTGTACCAGGAGAACAAGCGGGAATATGAAAAGCGT
GTTTCTGCAATAGTAGAACAAAGCTGGCGCGACTGTTGA

Translation (152 aa):
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV
RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKR
VSAIVEQSWRDC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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