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Report for CCDS29512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29512.1 Public Mus musculus 19 Gpr137 23 108 98 CCDS HistoryNCBI Gene:107173Re-query CCDS DB by CCDS ID:29512.1Re-query CCDS DB by GeneID:107173See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29512.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025909.10 ENSMUSP00000025909.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025909.10Link to Ensembl Protein Viewer:ENSMUSP00000025909.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000025909Re-query CCDS DB by Protein ID:ENSMUSP00000025909
Original member Current member EBI ENSMUST00000166115.8 ENSMUSP00000130969.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166115.8Link to Ensembl Protein Viewer:ENSMUSP00000130969.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166115Re-query CCDS DB by Protein ID:ENSMUSP00000130969
Original member Current member EBI ENSMUST00000237934.1 ENSMUSP00000158264.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000237934.1Link to Ensembl Protein Viewer:ENSMUSP00000158264.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000237934Re-query CCDS DB by Protein ID:ENSMUSP00000158264
Original member Current member NCBI NM_207220.3 NP_997103.1 Accepted alive Link to Nucleotide Sequence:NM_207220.3Link to Protein Sequence:NP_997103.1Re-query CCDS DB by Nucleotide ID:NM_207220Re-query CCDS DB by Protein ID:NP_997103Link to BLAST:NP_997103.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997103.1 396 Q80ZU9 396 100% 0 0

Chromosomal Locations for CCDS 29512.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6938370 6938529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6938756 6938874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6939012 6939140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6939261 6939410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6939529 6939754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6940352 6940401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6940483 6940839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGGAGAGTAACCTGTCTGGTCTGGTGCCTGCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTGACCC
TGGGGCTGACCGCTGCCTACACTGCCCTATATGCTCTGCTCTTCTTCTCTGTCTATGCCCAGCTCTGGCT
GGTGCTTCTGTATGGGCACAAGCGCCTCAGCTATCAGACAGTATTCCTGGCGCTCTGTCTGCTCTGGGCA
GCCTTGCGTACCACACTTTTCTCCTTCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCTTGC
CTTTTTGGCTTCTCTATTGCTGCCCTGTCTGCCTGCAGTTCTTCACACTGACGCTTATGAACCTCTACTT
TGTGCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGCTGGCTGTCCGA
GGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTGGTGAATGTACTGTGTGCAGTGCTGTCTCGCCAGC
GCCAGGCACAGCCCTGGGTCCTTCTGCTGGTACGTGTCCTGGTGAGCGACTCTCTCTTCGTCATCTGTGC
CCTCTCGCTTGCTGCCTGCCTCTGCCTTGTGGCCCGTCGAGCCCCTTCCACCAGCATCTACTTAGAGGCC
AAGGGGACCAGCGTGTGTCAGGCAGCTGCTATAGGGGGTGCCATGGTCCTTCTCTATGCCAGCCGGGCCT
GTTACAACCTGGCAGCTCTGGCCTTGGCCCCTCGGAGCCGGCTAGATGCCTTCGATTACGACTGGTACAA
CGTATCTGACCAGGCAGATCTGGTGAATGACCTAGGGAACAAAGGCTACCTGGTGTTTGGTCTCATCCTC
TTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAGGATC
TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCA
CTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGGC
TCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTC
CTCTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCACCACCACAGCCTCTATTCTACACCACAGACGTG
A

Translation (396 aa):
MESNLSGLVPAAGLVPALPPTVTLGLTAAYTALYALLFFSVYAQLWLVLLYGHKRLSYQTVFLALCLLWA
ALRTTLFSFYFRDTPRANRLGPLPFWLLYCCPVCLQFFTLTLMNLYFVQVVFKAKAKRRPEMSRGLLAVR
GAFVGASLLFLLVNVLCAVLSRQRQAQPWVLLLVRVLVSDSLFVICALSLAACLCLVARRAPSTSIYLEA
KGTSVCQAAAIGGAMVLLYASRACYNLAALALAPRSRLDAFDYDWYNVSDQADLVNDLGNKGYLVFGLIL
FVWELLPTTLLVGFFRVHRPPQDLSTSRILNGQVFGSRSYFFDRAGHCEDEGCSWEHSRSESTSMSGSLG
SGSWYGAIGREPGWGGASQTRTTPLLFSQVPGPGSHHHSLYSTPQT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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