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Report for CCDS29098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29098.1 Public Mus musculus 18 Zfp24 23 108 98 CCDS HistoryNCBI Gene:59057Re-query CCDS DB by CCDS ID:29098.1Re-query CCDS DB by GeneID:59057See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29098.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066497.11 ENSMUSP00000064637.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066497.11Link to Ensembl Protein Viewer:ENSMUSP00000064637.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000066497Re-query CCDS DB by Protein ID:ENSMUSP00000064637
Original member Current member EBI ENSMUST00000153337.1 ENSMUSP00000122579.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000153337.1Link to Ensembl Protein Viewer:ENSMUSP00000122579.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000153337Re-query CCDS DB by Protein ID:ENSMUSP00000122579
Original member Current member NCBI NM_001357447.1 NP_001344376.1 Accepted alive Link to Nucleotide Sequence:NM_001357447.1Link to Protein Sequence:NP_001344376.1Re-query CCDS DB by Nucleotide ID:NM_001357447Re-query CCDS DB by Protein ID:NP_001344376Link to BLAST:NP_001344376.1
Original member Current member NCBI NM_001357448.1 NP_001344377.1 Accepted alive Link to Nucleotide Sequence:NM_001357448.1Link to Protein Sequence:NP_001344377.1Re-query CCDS DB by Nucleotide ID:NM_001357448Re-query CCDS DB by Protein ID:NP_001344377Link to BLAST:NP_001344377.1
Original member Current member NCBI NM_021559.3 NP_067534.2 Accepted alive Link to Nucleotide Sequence:NM_021559.3Link to Protein Sequence:NP_067534.2Re-query CCDS DB by Nucleotide ID:NM_021559Re-query CCDS DB by Protein ID:NP_067534Link to BLAST:NP_067534.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344376.1 368 Q91VN1 368 100% 0 0
NP_001344377.1 368 Q91VN1 368 100% 0 0
NP_067534.2 368 Q91VN1 368 100% 0 0

Chromosomal Locations for CCDS 29098.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 24014147 24014685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24017284 24017431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24017668 24018087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1107 nt):
ATGTCTGCACAGTCAGTGGAAGAAGATTCAATACTTATCATCCCAAATCCAGATGAAGAAGAAAAAATTC
TGAGAGTGAAACTAGAGGAGGATCCTGATGGTGAAGAGGGATCGAGCATTTCCTGGAACCATCTCCCTGA
CCCGGAGGTTTTCCGGCAGCGCTTCAGGCAATTTGGATACCAGGATTCACCAGGACCTCGAGAGGCGGTG
AGCCAGCTCCGAGAACTTTGCCGCCTGTGGCTCAGACCAGAGACACACACAAAGGAGCAGATACTGGAGC
TGGTAGTTTTGGAGCAGTTTGTTGCCATCCTACCCAAGGAGCTACAGACTTGGGTTCGAGAGCATCACCC
AGAGAATGGAGAGGAGGCAGTGGCTGTTCTAGAGGACTTGGAGAGTGAGCTTGATGACCCTGGTCAGCCG
GTTTCTCTCCGTCGGCAGAAACGGGAAGTGCTTGTAGAAGAGATAACATCTCAAGAAGATGCTCAGGGAT
TACCGAGTTCTGAGCTGGATGCTGTAGAGAACCAGCTCAAGTGGGCATCCTGGGAACTCCACTCTCTGAG
GCACTGTGATGATGATGCCACGACAGAAAATGGAGCACTGGCTCCCAAGCAGGAGATGGCTTCAGCTGGA
GAGTCTCATGAAGGCCCCGGCACTCTCAACATAGGTGTTCCCCAGCTTTTTAAATATGGAGAAACCTGTT
TTCCCAAGGGTAGGTTTGAAAGAAAGAGAAATCCTTCTAGAAAGAAACAACACATATGTGATGAATGTGG
GAAACACTTCAGTCAGGGCTCCGCCCTCATTCTTCATCAGAGAATCCACAGTGGCGAGAAACCGTATGGA
TGTGTTGAATGTGGAAAAGCCTTCAGCAGAAGCTCCATCCTTGTGCAACACCAGAGAGTCCACACTGGAG
AAAAACCCTACAAATGCCTTGAATGTGGGAAAGCTTTTAGCCAGAATTCTGGGCTCATTAACCATCAGCG
TATCCACACTGGGGAGAAACCTTACGAGTGTGTGCAGTGTGGGAAATCCTACAGTCAGAGCTCAAACCTC
TTCAGACATCAGAGACGACACAATGCAGAAAAACTTTTGAATGTTGTGAAGGTTTAA

Translation (368 aa):
MSAQSVEEDSILIIPNPDEEEKILRVKLEEDPDGEEGSSISWNHLPDPEVFRQRFRQFGYQDSPGPREAV
SQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVREHHPENGEEAVAVLEDLESELDDPGQP
VSLRRQKREVLVEEITSQEDAQGLPSSELDAVENQLKWASWELHSLRHCDDDATTENGALAPKQEMASAG
ESHEGPGTLNIGVPQLFKYGETCFPKGRFERKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYG
CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNL
FRHQRRHNAEKLLNVVKV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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