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Report for CCDS27710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27710.1 Public Mus musculus 15 Parvg 23 108 98 CCDS HistoryNCBI Gene:64099Re-query CCDS DB by CCDS ID:27710.1Re-query CCDS DB by GeneID:64099See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27710.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023074.8 ENSMUSP00000023074.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023074.8Link to Ensembl Protein Viewer:ENSMUSP00000023074.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000023074Re-query CCDS DB by Protein ID:ENSMUSP00000023074
Original member Current member NCBI NM_022321.4 NP_071716.3 Accepted alive Link to Nucleotide Sequence:NM_022321.4Link to Protein Sequence:NP_071716.3Re-query CCDS DB by Nucleotide ID:NM_022321Re-query CCDS DB by Protein ID:NP_071716Link to BLAST:NP_071716.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071716.3 331 Q9ERD8 331 100% 0 0

Chromosomal Locations for CCDS 27710.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84327005 84327083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84328295 84328359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84328864 84328966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84330023 84330163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84330979 84331094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84332291 84332346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84332691 84332713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84334342 84334400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84334586 84334654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84337785 84337886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84340854 84340926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84341339 84341448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGGAGTTAGAGTTCCTCTATGACCTGTTGCAGCTCCCAAAGGAGGTAGCTCAGCCCACGGAGGAAGAGC
TTCCACGAGGAGGAAAGAAGAAATATCTGTCACCCAATTCCAAGAGGAACCCCAAGTTTGAAGAACTGCA
GAAGGTGCTGATGGAATGGATCAACACCACACTCCTCCCGGAGCACATCGTGGTCCGCAGCCTGGAGGAA
GACATGTTTGATGGACTTATTCTGCACCACCTGTTCCAGAAGTTGGCATCGCTCAAGCTGGAAGTGGAGG
AAATCTCTCTGACCTCGGCCAGCCAGAGGCACAAGCTGGGGGTCATCCTGGAGGCCGTCAACCAGAACCT
ACAGGTGGAAGAGAAGCAGGCCAAGTGGAGCGTGGAGACCATCTTCAACAAGGACCTGCTGGCCACCTTG
CATCTCCTGGTGGCCCTGGCCAAACGCTTCCAGCCGGACCTGCCCCTCCCAGACAACGTCCAGGTGGAAG
TCATCCACATTGAGAGCACCAAGACCGGCCTGAAGTCGGACAAGCAGGTGGAGCAGCTCACAGAATGCAA
GTCACACAAGGACCAGCCTTTACAGGACGCCTTTGATGAATTATTTAAGCTGGCTCCGGAGAAAGTGCAC
GCCGTCCAAGAGGCCATTGTGAGCTTTGTCAACCAGAAGCTAGAGCGCCTGGGCCTGTCTGTGCAGAGTC
TGGATACCCAGTTTGCAGATGGCGTCATCCTGCTCCTGCTGATTGGACAACTGGAAGGCTTCTTCTTGCA
TCTGAAGGAATTCTATCTCACTCCCAGCTCTCCCACAGAAATGCTGCACAATGTCACCCTAGCCCTGGAT
CTGCTCAAGGATGAAGGCCTGTTCAGCTACCCTGTCAACCCTGAAGATATTGTGAACAAGGACGCCAAGA
GCACACTGAGGATACTTTACAGCCTATTCCAGAAGCATTCACTGAGGGCGGAGGGTGGAGGGGCACACCA
TGCTACCCCAAACTAG

Translation (331 aa):
MELEFLYDLLQLPKEVAQPTEEELPRGGKKKYLSPNSKRNPKFEELQKVLMEWINTTLLPEHIVVRSLEE
DMFDGLILHHLFQKLASLKLEVEEISLTSASQRHKLGVILEAVNQNLQVEEKQAKWSVETIFNKDLLATL
HLLVALAKRFQPDLPLPDNVQVEVIHIESTKTGLKSDKQVEQLTECKSHKDQPLQDAFDELFKLAPEKVH
AVQEAIVSFVNQKLERLGLSVQSLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPSSPTEMLHNVTLALD
LLKDEGLFSYPVNPEDIVNKDAKSTLRILYSLFQKHSLRAEGGGAHHATPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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