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Report for CCDS27561.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27561.2 Public Mus musculus 15 Nrbp2 23 108 98 CCDS HistoryNCBI Gene:223649Re-query CCDS DB by CCDS ID:27561.2Re-query CCDS DB by GeneID:223649See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 27561.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000228366.2 ENSMUSP00000154287.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000228366.2Link to Ensembl Protein Viewer:ENSMUSP00000154287.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000228366Re-query CCDS DB by Protein ID:ENSMUSP00000154287
Original member Current member NCBI NM_001358359.1 NP_001345288.1 Accepted alive Link to Nucleotide Sequence:NM_001358359.1Link to Protein Sequence:NP_001345288.1Re-query CCDS DB by Nucleotide ID:NM_001358359Re-query CCDS DB by Protein ID:NP_001345288Link to BLAST:NP_001345288.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345288.1 499 Q91V36 499 100% 0 0

Chromosomal Locations for CCDS 27561.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76087076 76087144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76087231 76087286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76087373 76087436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76087521 76087574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76088291 76088426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76088510 76088560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76088650 76088752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76088865 76088997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76089437 76089532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76089610 76089665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76089748 76089831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76089902 76089925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76090052 76090146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76090246 76090286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76090453 76090542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76090638 76090739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76090808 76090930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76091371 76091493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1500 nt):
ATGGCGGCCCCGGAGCCGGCGCCGAGGAGAGGCCGGGAGCGCGAGCGGGAGGACGAGAGCGAGGACGAGA
GCGACATCCTGGAGGAGAGCCCGTGTGGCCGCTGGCAGAAGCGGCGGGAGCAGGTGAACCAAGGGAACAT
GCCCGGGATCCAGAGCACCTTTCTGGCCATGGACACGGAGGAGGGTGTAGAAGTGGTGTGGAACGAACTT
CACTTCGGGGATAGGAAGGCCTTTGCGGCCCATGAGGAGAAGATCCAGACCATGTTTGAGCAGCTGGCGC
TGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGGT
CATCTTCATCACAGAATACGTGTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAAGACCAAGAAGAACCAC
AAGGCCATGAACGCCCGGGCCTGGAAGCGCTGGTGTACGCAGATCCTGTCTGCACTCAGTTTTTTGCACG
CCTGCAGTCCCCCCATCATCCACGGGAACCTGACGAGCGACACCATCTTCATTCAGCACAATGGCCTCAT
CAAGATCGGCTCCGTGTGGTACCGCATCTTCTCCAATGCACTTCCTGATGATCTCCGGAGCCCTATTCGA
GCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAATGATGGGACTG
CTGTGGACATCTTCTCCTTCGGGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGA
TACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAACATGCGGGAATTC
ATCCTCTCCTGCCTGGCCCGGGACCCTGCCCGCCGACCCTCAGCCCACAACCTCCTCTTCCACCGAGTGC
TCTTTGAGGTGCACTCGCTGAAGCTGCTGGCAGCTCACTGCTTCATCCAGCACCAGTACCTCATGCCTGA
GAATGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCCATGCAGTTTTGGCTGAGATGCCGCAGCCCCAT
GGACCCCCAATGCAGTGGCGGTACTCAGAGGTCTCCTTCTTGGAGCTGGACAAATTCCTAGAGGATGTCA
GGAACGGGATCTATCCACTGATGAACTTTGCGGCTGCTCGGCCCTTGGGGCTTCCCCGTGTGTTGGCCCC
ACCCCCAGAGGAAGCCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTTGACTCGGAGACCAGGAAGGTG
GTCCAGATGCAGTGCAACCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTTGGTGC
TTGAGGACCGGCTACATCGGCAGCTGACCTATGATCTGCTCCCAACGGACAGTGCCCAGGACCTCGCTGC
TGAACTAGTGCATTATGGCTTCCTGCACGAGGATGACAGGACAAAGCTAGCAGCCTTTCTGGAGACCACT
TTTCTCAAGTACCGAGGGACGCAAGCGTGA

Translation (499 aa):
MAAPEPAPRRGREREREDESEDESDILEESPCGRWQKRREQVNQGNMPGIQSTFLAMDTEEGVEVVWNEL
HFGDRKAFAAHEEKIQTMFEQLALVDHPNIVKLHKYWLDASEARARVIFITEYVSSGSLKQFLKKTKKNH
KAMNARAWKRWCTQILSALSFLHACSPPIIHGNLTSDTIFIQHNGLIKIGSVWYRIFSNALPDDLRSPIR
AEREELRNLHFFPPEYGEVNDGTAVDIFSFGMCALEMAVLEIQANGDTRVTEEAIARARHSLSDPNMREF
ILSCLARDPARRPSAHNLLFHRVLFEVHSLKLLAAHCFIQHQYLMPENVVEEKTKAMDLHAVLAEMPQPH
GPPMQWRYSEVSFLELDKFLEDVRNGIYPLMNFAAARPLGLPRVLAPPPEEAQKAKTPTPEPFDSETRKV
VQMQCNLERSEDKARWHLTLLLVLEDRLHRQLTYDLLPTDSAQDLAAELVHYGFLHEDDRTKLAAFLETT
FLKYRGTQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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